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SCNpilot_expt_500_bf_scaffold_8111_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: 1..408

Top 3 Functional Annotations

Value Algorithm Source
Putative O-antigen polymerase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZZ9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 135.0
  • Bit_score: 124
  • Evalue 7.90e-26
Uncharacterized protein {ECO:0000313|EMBL:KIZ46843.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 121.0
  • Bit_score: 186
  • Evalue 1.80e-44
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 132.0
  • Bit_score: 120
  • Evalue 4.70e-25

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
TTGGACTTCTGGAGCAAGGCCGCGATTTTCGTGAAACAGGCGCCGCTGTTCGGTCATGGCACCGGCAGCATCAGGCCGCTCTATCAGTCCATGGAAGCAACCCGACCCTCGCCCTACGGCGAGGCTGTAGCGGATCCGCATAATCAGTTCCTGCATATCGTGCTTCAGGTAGGTCTGGTCGGTGGCCTTCTATTGCTGGCAATGTGGGCCTCGCATGCCTGGATGTTCCTCGGGCGCGATTTTGCCAGCGCGCTCGGACTGGCCGTTGTGCTGCAGAACTTCGTTGGCTCGCTATTCAACAGCCATCTGTCACAGGTGACTCAAGGCATGTTGTACTGTCTGGCCGTCGGGCTGCTCGGCGCGATCGTCATGACCGCAAAAGCGCGCGCCACACCGTCGGATCACTGA
PROTEIN sequence
Length: 136
LDFWSKAAIFVKQAPLFGHGTGSIRPLYQSMEATRPSPYGEAVADPHNQFLHIVLQVGLVGGLLLLAMWASHAWMFLGRDFASALGLAVVLQNFVGSLFNSHLSQVTQGMLYCLAVGLLGAIVMTAKARATPSDH*