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SCNpilot_expt_500_bf_scaffold_9970_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(243..1463)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TP8_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 406.0
  • Bit_score: 695
  • Evalue 3.40e-197
  • rbh
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 406.0
  • Bit_score: 695
  • Evalue 1.10e-197
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABJ04686.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 406.0
  • Bit_score: 695
  • Evalue 4.70e-197

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGGATCGACGCCCCTCGACGCGGCTGTTTCGGGCCGTTGCCGCCACCGCCGCATTGTTCCTCGCCTCCAGCGCCCACGCCGCGGACAAGAAATACGATCCGGGCGCCAGCGATACCGAGATCAAGCTGGGCCAGACCGTTCCGCATTCGGGGCCGGGATCGCTCTATGGCGTGCTGGGCCGCGTCGGCGAGGCCTATTTCCAGATGCTGAACGAGAAGGGCGGCATCAATGGCCGCAAGATCAAGTTCATCTCGGCGGACGATGCCTATTCCGCGCCGAAGGCGGTCGAGCAGACCCGCCGTCTCGTCGAACAGGAAGAGGTGTTGGCGCTGTTCGGCTCACTCGGCACCGCGCCGCAGACCGCCGTGCACAAGTACCTCAACAGCAAAGGCGTGCCGCAGCTGCTGCTTAACACCGGCGCATCGAAGTGGAACGATCCGAAGAAGAACAAATGGACGCTGGCCGGGCTGCCGCTCTATCCGACCGAAGCCCGCATTCTCGCCAAGTACGTTCTCAGCGTGAATCCCAACGCCAAGGTGGCGATCTTCTATCAGAACGATGATTTTGGCCGCGATTTCCTCGGTCCGTTCAAGGAGGAGCTTGCGAAGGCCGGCGGCAACGCCAAGGTGATCGCGGAGGCGACCTACGACCTGACCGATCCGACCATCGACTCGCAGATCATCAATCTGGCGAAGTCGGGCGCCGACGTGTTCTATAACATCAGCACCGGCAAGGCGACGTCGCAGTCGATCCGCAAGCTTGCCGAACTGGGCTGGAAGCCGCTGCACCTGCTGTCGGCGGGATCGACCGGACGCTCGATCCTGCACGCGGCCGGACTGGACAATGCCAAGGGCATCGTTGCGATTCGCTACGCCAAGGAAGTCGGCGTGCCGCGCTTCGAGAACGATCCGGACGTGGTCGCCTTCGAGGAGTTGCGCAAGAAGTATCTGCCGACCGTCGACCGCGACAACACCATCGCGTTCGCCGGCTACGGCCAGGCAGTGACCATGGCGGAAATCCTGCGCCGCTGCGGCGACAACCTCACCCGCGAGAACGTGCTGAAGCAGGCGGCCAGCCTGAACGGCTTCCATTCGCCGTATATGCTCGACGGCATCACCTATTCGTTCACGCCGGACGATTACACGCCGATGAAGACGCTCTATATATCGACCTTCAACGGTGCCGATTGGGATATTTCCGAGAAGCCGTATAGCGACTAG
PROTEIN sequence
Length: 407
MDRRPSTRLFRAVAATAALFLASSAHAADKKYDPGASDTEIKLGQTVPHSGPGSLYGVLGRVGEAYFQMLNEKGGINGRKIKFISADDAYSAPKAVEQTRRLVEQEEVLALFGSLGTAPQTAVHKYLNSKGVPQLLLNTGASKWNDPKKNKWTLAGLPLYPTEARILAKYVLSVNPNAKVAIFYQNDDFGRDFLGPFKEELAKAGGNAKVIAEATYDLTDPTIDSQIINLAKSGADVFYNISTGKATSQSIRKLAELGWKPLHLLSAGSTGRSILHAAGLDNAKGIVAIRYAKEVGVPRFENDPDVVAFEELRKKYLPTVDRDNTIAFAGYGQAVTMAEILRRCGDNLTRENVLKQAASLNGFHSPYMLDGITYSFTPDDYTPMKTLYISTFNGADWDISEKPYSD*