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SCNpilot_expt_500_bf_scaffold_9970_6

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: 4795..5547

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BB2_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 250.0
  • Bit_score: 346
  • Evalue 1.80e-92
XRE family transcriptional regulator {ECO:0000313|EMBL:KIZ39493.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 249.0
  • Bit_score: 352
  • Evalue 6.00e-94
MATE efflux family protein; K03327 multidrug resistance protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 250.0
  • Bit_score: 346
  • Evalue 5.70e-93

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGCGCGTCGACAGTCGGCGCGTGTTCGTGATCGCGGGCCCGGCGATGCTCGCCAATCTGACGACTCCGCTGCTCGGCGTCGTCTCCACCGCCGCCATCGGCCAGCTCGGCGAAGCGCAACTGCTCGGCGGCGTGGCGCTGGCCTCGGTGGCGTTCGACTGCGTGTTCTGGCTGTTCGGCTTTCTCCGCATGGCCACCGTCGCGTTCACCGCGCAAGCCCTGGGCGCCGACGACCGTAGTGAGATCCGCGCCGTGCTGATCCGCGCGCTGCTGCTCGCTGCGCTGATCGGCCTGACCTTGATCGCGCTGCGGCTACCGCTGGCATCGCTGATCTTCTCGGCAATGGGCGGCAGCGACGCGGTGACGGCCGCTGCCGCCAGCTACTTCCACATCCGGCTGTGGTCGGCGCCGTTCATGCTCGGCAATTATGTCATGCTGGGCTGGCTGGTCGGGCAGGCGCGCACCGGGCTGGCGCTTGGAATTCAGGTCGGCATCAACCTGCTCAACATGGCGCTGACCATCCTGCTGGTGCTGCACGCCGGTTACGGCATCGAAGGCGCCGCCATCGCCACGGTGATCGCCGAGACCACCGGCTTCGCCGCCGGACTCGCGGTCGCATGGCATTTGCTCGGCGCGAACTTCCATGTCGCACGAGGCCTGCTGTTCGATCGCGCCAGATGGCTGCGCATGCTGGCGGTCAATCGCGACATCATGATCCGTACCGCGGCATTGATCGGCGGCTTTTTCTTCTTC
PROTEIN sequence
Length: 251
MRVDSRRVFVIAGPAMLANLTTPLLGVVSTAAIGQLGEAQLLGGVALASVAFDCVFWLFGFLRMATVAFTAQALGADDRSEIRAVLIRALLLAALIGLTLIALRLPLASLIFSAMGGSDAVTAAAASYFHIRLWSAPFMLGNYVMLGWLVGQARTGLALGIQVGINLLNMALTILLVLHAGYGIEGAAIATVIAETTGFAAGLAVAWHLLGANFHVARGLLFDRARWLRMLAVNRDIMIRTAALIGGFFFF