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SCNpilot_expt_500_bf_scaffold_12211_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(996..2261)

Top 3 Functional Annotations

Value Algorithm Source
Putative tetracycline-efflux transporter n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RUM3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 413.0
  • Bit_score: 638
  • Evalue 5.10e-180
  • rbh
Putative tetracycline-efflux transporter {ECO:0000313|EMBL:CCD85650.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 413.0
  • Bit_score: 638
  • Evalue 7.10e-180
tetA; tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 420.0
  • Bit_score: 633
  • Evalue 3.90e-179
  • rbh

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Taxonomy

Bradyrhizobium sp. ORS 285 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAGCGATCAGTCGCCGGAGGCCAGCGTGACGCCAAGCCAGCCGGTCGGCGCATCGCGCAATGCGGCGGTGGCTTTCATCTTCGTCACTATCCTGCTCGATATGCTGGCGCTCGGCATGATTATGCCGATCCTGCCCAAGCTGGTGGAAAGCTTCGTCGACAACGACACCGCAACGGCGGCGCGTATCTTCGGCGTGTTCGGCACTGCGTGGGCGCTGATGCAGTTCATCTTCTCGCCGGTGCTTGGCAGCCTGTCGGATCGCTTCGGCCGCCGCCCGGTGGTGCTGCTGTCGAATTTCGGTCTTGCGCTCGATTACGTTCTGATGGCACTCGCGCCCTCGCTGTGGTGGCTGTTCGTCGGTCGCGTGATTTCCGGCATCACGGCGGCGAGCGTGTCGACCGCGTTCGCCTACATCTCCGATATCACCGCGCCGGATAAACGTGCCGCGGTGTTCGGCAAGGTCGGCGCCGCATTCGGCGCGGGCTTCATTCTCGGGCCGGCGCTCGGCGGGTTGCTTGGCGAGGTCGATCCGCGCTTGCCGTTCTGGGTGGCGGCTGGTTTGAGTTTTGCCAATACGCTTTATGGCTTACTGATCCTGCCGGAGTCGCTGCCTCGCAACCGACGCGCGCCGTTTCACTGGCGCAGCGCCAATCCGCTCGGCGCGTGGCGGCTGTTGCGGTCCGATGCGACGCTGACGGGATTATCGGTGGTGAACTTCATCGCGCAAGTGGCGCATGTCGTATTGCCCAGCACCTACGTGCTGTATGCAACATACCGTTACGGCTGGGACGAGAAGACGGTCGGGCTGACGCTGGCGATGGTCGGCGTCTGCGCCATGGTGGTGCAGGGCGGTGCGGTGGGGCCGATCGTCAATCGCCTCGGTGAACGTAACGCGCTGGCGCTTGGCCTGGGGTTCGGCGCGCTTGGCTTCCTCATCTTCGGCCTTGCGCCGACGGGTCCGATCTCGTGGCTCGGCATTCCGGTGATGGCACTGTGGGGAATTGCCGGACCGGCGACATTGGGATTAATGACGCGACGCGTGGCGCCGGATCAACAGGGTCAATTGCAAGGCGCATCCGGCAGCGTGCAGAGCATGGCGCAACTGGTCGGACCTTTTCTGTTCACGCTGACGTTTGCTTATTTCATCGCGCCGACGTCGCCGCTCAAATTTCCGGGTGCGCCGTTTGTGCTGGCGGCAGCGTTGCTGCTGATCGCTTTGCTCATCGCGCGCCGTGTGACGGCGGCGATGGAGCCGGCGCAATAG
PROTEIN sequence
Length: 422
MSDQSPEASVTPSQPVGASRNAAVAFIFVTILLDMLALGMIMPILPKLVESFVDNDTATAARIFGVFGTAWALMQFIFSPVLGSLSDRFGRRPVVLLSNFGLALDYVLMALAPSLWWLFVGRVISGITAASVSTAFAYISDITAPDKRAAVFGKVGAAFGAGFILGPALGGLLGEVDPRLPFWVAAGLSFANTLYGLLILPESLPRNRRAPFHWRSANPLGAWRLLRSDATLTGLSVVNFIAQVAHVVLPSTYVLYATYRYGWDEKTVGLTLAMVGVCAMVVQGGAVGPIVNRLGERNALALGLGFGALGFLIFGLAPTGPISWLGIPVMALWGIAGPATLGLMTRRVAPDQQGQLQGASGSVQSMAQLVGPFLFTLTFAYFIAPTSPLKFPGAPFVLAAALLLIALLIARRVTAAMEPAQ*