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SCNpilot_expt_500_bf_scaffold_12449_3

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(2244..2789)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 181.0
  • Bit_score: 334
  • Evalue 2.80e-89
ABC transporter n=1 Tax=Afipia birgiae RepID=UPI0002FDA753 similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 181.0
  • Bit_score: 341
  • Evalue 7.20e-91
General L-amino acid transport ATP-binding protein AapP {ECO:0000313|EMBL:EKS39992.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 181.0
  • Bit_score: 339
  • Evalue 2.90e-90

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GATGGCATCGAACTTGGCCCCCGCCTGCGTCGTGTCGATGAAGTGCGGCGGGAAGTCGGGATGGTGTTTCAGAGTTTCAATCTGTTCCCGCACCTGACGGTCTTGGAAAACTGTACATTGGCGCCGATTTGGGTTCGGCATATGCCGAAGAAGGACGCCGAGGCAGCGGCGATGAAGTATCTCGAGCGCGTCCGTATTCCCGACAAGGCTGATAAATATCCGGGACAGATTTCCGGCGGTCAGCAGCAGCGCGTCGCAATTGCCCGCGCGCTTACGATGAATCCGAAAGTCATGCTGTTCGACGAGCCGACGTCGGCCCTCGATCCGGAAATGGTCAAGGAGGTGCTCGACACCATGGTCGACCTGGCCGAGGAAGGCATGACCATGCTGGTGGTGACCCATGAAATGGGATTCGCCAAGGAAGTCGCCGATCGCGTTGTCTTCATGGACGCCGGCCAGATCATCGAGGCGAACACGCCGGCGAATTTCTTTACCAGTCCGCAACACGCGCGGACCCAGCTTTTTCTAAGCCAGATCCTGCGCTGA
PROTEIN sequence
Length: 182
DGIELGPRLRRVDEVRREVGMVFQSFNLFPHLTVLENCTLAPIWVRHMPKKDAEAAAMKYLERVRIPDKADKYPGQISGGQQQRVAIARALTMNPKVMLFDEPTSALDPEMVKEVLDTMVDLAEEGMTMLVVTHEMGFAKEVADRVVFMDAGQIIEANTPANFFTSPQHARTQLFLSQILR*