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SCNpilot_expt_500_bf_scaffold_13961_5

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(4577..5476)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B87_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 295.0
  • Bit_score: 402
  • Evalue 4.30e-109
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 295.0
  • Bit_score: 402
  • Evalue 1.40e-109
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD86349.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 295.0
  • Bit_score: 402
  • Evalue 6.10e-109

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGCGTTTCGATCTGGTCGATCTGCAGTTGTTCGTCGCCGTGGCGGAGGCGCGCAGCATTACCCATGGGGCGCCGCGCGTGCACCTCGCCGTCGCTTCCGCCAGCGAACGCCTCAAGACTCTCGAACAGGCGCTCGACGTCACGCTGCTGGTGCGCGGCCGCCACGGCGTCTCGCTGACGGAGGCGGGCGAAAGCCTGCTCGATCATGCCCGGGTCGTGCTGGCCGATGTCGAGGCGCTGCGGGGGGATCTCGCCGCCTATGCTGGCGGCCTCAAGAGCAGCATTCATCTGCTGGCGAACACGTCGGGCCTGTCGGAACATCTGCCACGCGCACTAGCGAGTTTTCTGCGCGAACATCCCCAGGTGAATGTCGATATCGAGGAGCGGGAAAGCATCGGCATCGCCGAGGCCATCGCGGCGGGCAGCGCCGATATCGGCATTGCCGTCGACGCGGCATTGCCCAAGGGAATTGAGCGCTTTGCCTTTCGCGACGACCCGCTGGTGCTGGTGGTGCCGGCTCAAGATGCGCTGGCGCATCGTCGCGCCATCGACTTCCGCGACGTGCTCGCGCGCGATTTCATTGGGCTGGCGATCAATACCGCATTGCAGACCCATCTCGCGACACAGACCGCGCGGTTCGGCGCGCGGTTGCGCTTTCGTGCGCGGCTGAAGGACTTCGATGCCATCTGCCAGATGGTGGCCGCCGATGTCGGTGTCGCGGTGGTGCCGGAAGCCGCCGCGCGGCGCTGCAGCCGCAGCATGGCGATCAAGCGCGTGCGTATCCGCGATGCCTGGGCGGCGCGGCGGCTGGTGATCTGCGTGCGCAGCCTGCAGGCGCTGCCGCGCCCGGCGCAGCAACTGGTGGCGCATCTGCGCAGTGCCGCGCCCGCCAAGGCGTAG
PROTEIN sequence
Length: 300
MRFDLVDLQLFVAVAEARSITHGAPRVHLAVASASERLKTLEQALDVTLLVRGRHGVSLTEAGESLLDHARVVLADVEALRGDLAAYAGGLKSSIHLLANTSGLSEHLPRALASFLREHPQVNVDIEERESIGIAEAIAAGSADIGIAVDAALPKGIERFAFRDDPLVLVVPAQDALAHRRAIDFRDVLARDFIGLAINTALQTHLATQTARFGARLRFRARLKDFDAICQMVAADVGVAVVPEAAARRCSRSMAIKRVRIRDAWAARRLVICVRSLQALPRPAQQLVAHLRSAAPAKA*