ggKbase home page

SCNpilot_expt_500_bf_scaffold_22529_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(1..399)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07J54_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 133.0
  • Bit_score: 247
  • Evalue 7.90e-63
two component sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 133.0
  • Bit_score: 247
  • Evalue 2.50e-63
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABJ08030.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 133.0
  • Bit_score: 247
  • Evalue 1.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
GTGGAGTCGATTCTGTTCGGTCACGAGAAAGGCGCCTTTACCGGCGCAACCGAGCGGCACACGGGCAAATTCGTCGAAGCCTCGGGCGGCACGCTGTTCCTCGATGAAGTCAGCGAACTGCCGCTGAACGCCCAGGTGAAACTGCTGCGCGCGCTGCAGGAAGGCACCGTGGAAGCCGTCGGCGGCCGCAGGCCGGTGAAGGTCGACGTGCGGATCATATCCGCCAGCAACCGCAACCTGATCGAGCGCGTCAAAAGCGGTCTGTTCCGCGAAGACCTGTTCTATCGGCTGCACGTCCTGCCGATCACCATTCCACCGCTGCGCGCGCGTCGCGAGGACATTCCGCATCTGGTGCGGCACTTCCTCGCCCGGTTCTGCGCCGAGGAAAATCGCAGTATC
PROTEIN sequence
Length: 133
VESILFGHEKGAFTGATERHTGKFVEASGGTLFLDEVSELPLNAQVKLLRALQEGTVEAVGGRRPVKVDVRIISASNRNLIERVKSGLFREDLFYRLHVLPITIPPLRARREDIPHLVRHFLARFCAEENRSI