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SCNpilot_expt_500_bf_scaffold_22529_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: 495..845

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZD4_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 124
  • Evalue 8.90e-26
two component sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 124
  • Evalue 2.80e-26
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABD89502.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 124
  • Evalue 1.20e-25

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGAGCGAAGGGGATCAACTCGGCGTCGCCGATTTCCCGCATCCGGCGACACAGCAACTGGACCAGGCGGACTACGCCGAAGAGCCGCTGCTGATCGAATCCTCGGCGCACTCGATGGCGCCGGATATTATCCCCGGCGATTTCCCTACGCCACTACCGACCGGCACGCTCAATATGCTTGCCGAGGACGGCGAGATGCGCCCGCTCGGCGACATGGAAGCGGAGATCATCCGCTTCGCCGTTGCCCTCTATCGCGGGCAGATGTCGGAAGTGGGGCGCCGGCTGAAAATAGGCCGGTCGACGCTTTATCGAAAACTCGACGAAGCCGCCGCCGATCAGAAGTCCGAATGA
PROTEIN sequence
Length: 117
MSEGDQLGVADFPHPATQQLDQADYAEEPLLIESSAHSMAPDIIPGDFPTPLPTGTLNMLAEDGEMRPLGDMEAEIIRFAVALYRGQMSEVGRRLKIGRSTLYRKLDEAAADQKSE*