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SCNpilot_expt_500_bf_scaffold_19486_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(354..911)

Top 3 Functional Annotations

Value Algorithm Source
Possible transcriptional regulator, TetR family n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NAS4_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 182.0
  • Bit_score: 251
  • Evalue 5.90e-64
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 182.0
  • Bit_score: 251
  • Evalue 1.80e-64
Possible transcriptional regulator, TetR family {ECO:0000313|EMBL:CAE26550.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 182.0
  • Bit_score: 251
  • Evalue 8.20e-64

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAAAGCTATCGCTGAACGTTCGGATATTTTGCCGCAACTCGCTGAAGTGTTTCGCGCTCACGGTTACGAGGGCGCGACGCTGGCGCTGATCGGCGAAGCCACGTCGCTTGGCAAGGGCAGCCTTTATCACTTCTTTCCCGGCGGCAAATCGCAGATGGCTGCGGAGGTGCTGGCGGAGATCGATCGCTGGTTCGAGGACAACATCTTCACGCCGCTGCAGGCGGCCGACGATCCGGCGCGCGCGGTGGCGGAGATGGTCGAAGCGGTGGACCGCTATTTTCGTTCCGGCCAACGAGTCTGTCTGGTCGGCGTCATTGCGCTCGGTGCGGCGCGCGATTCATTCGCGACGCAGGTGCGCGATTATTTCAGCCGCTGGCAAACGGCGCTGACGGCGGCCTTGAAGCGTCTCGGCCTCGGCGCCGCTGCCGCGCGGCGGCGCGCCGAGGCCGCGCTGCTCAGCATTCAGGGCGCGCTGGTGCTGGCGCGCGCGATGGACGATCCGAAAGTCTTCAGCCGCGCCATGGCCGATCTCAAGAAGCAACTGCTCGCGGCGTGA
PROTEIN sequence
Length: 186
MKAIAERSDILPQLAEVFRAHGYEGATLALIGEATSLGKGSLYHFFPGGKSQMAAEVLAEIDRWFEDNIFTPLQAADDPARAVAEMVEAVDRYFRSGQRVCLVGVIALGAARDSFATQVRDYFSRWQTALTAALKRLGLGAAAARRRAEAALLSIQGALVLARAMDDPKVFSRAMADLKKQLLAA*