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SCNpilot_expt_500_bf_scaffold_39819_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(511..948)

Top 3 Functional Annotations

Value Algorithm Source
VirB4 family type IV secretion/conjugal transfer ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9G8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 139.0
  • Bit_score: 271
  • Evalue 4.30e-70
Type IV secretion system protein virB4 {ECO:0000313|EMBL:CEG10295.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 139.0
  • Bit_score: 271
  • Evalue 6.00e-70
AAA ATPase; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 139.0
  • Bit_score: 267
  • Evalue 2.60e-69

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGATGAACCTCGCCGAATACCGCAACCGCAACAGCCGACTCGCCGACTTCCTGCCGTGGGTGGGCCTGGTGGGCGCCGGCATCGTCCTCAACAAGGACGGCAGCTTCCAGCGCACCGCGCAGTTCCGCGGCCCCGATCTCGACAGCGCCGTCCCGGCCGAACTGGTCGCTGTCGCCGGCCGCCTCAACAATGCCTTCCGACGCCTCGGCTCCGGCTGGGCGATCTTCGTCGAGGCGCAGCGCCATGCCTCGAACCTCTATCCCGACAGCCGCTTTCCCGATCCCGCGTCGGCGCTGGTCGATGCCGAGCGCAAGGCGGATTTCGAGGAAGCCGGCGCGCATTTCGAGTCGAGCTATTTCCTGACCTTCACCTATCTGCCGCCGGCCGAGGACGCCGCGCGTGCAGAATCCTGGCTCGCCTCGACCCCAACGAGGTGA
PROTEIN sequence
Length: 146
MMNLAEYRNRNSRLADFLPWVGLVGAGIVLNKDGSFQRTAQFRGPDLDSAVPAELVAVAGRLNNAFRRLGSGWAIFVEAQRHASNLYPDSRFPDPASALVDAERKADFEEAGAHFESSYFLTFTYLPPAEDAARAESWLASTPTR*