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SCNpilot_expt_500_bf_scaffold_2565_5

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(4311..5252)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TPZ4_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 313.0
  • Bit_score: 605
  • Evalue 3.50e-170
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 313.0
  • Bit_score: 605
  • Evalue 1.10e-170
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO27031.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 313.0
  • Bit_score: 605
  • Evalue 5.00e-170

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGAATGTGACCTTGCGCCAGCTCCAGGTGTTTCTGTCGGTGGCCGCCACGCGCAACTTCAGCCGCACGGGCGACCAGGTCGGACTGACGCAACCGGCCGTGAGCCGCAGCATCACCGAGCTGGAGGCGCAGCTCGGCCTGCAGCTGCTCAACCGCACGACGCGCGAGGTCGACCTCACCGACGCGGGCCGCAGCCTCGCGGTGCGGCTGCCGCGCGTGCTCGAAGACCTGGAGGCCACGCTGCTCGACGTGCAGGGCATGTCCACCGCGCTGCACGGCCGCGTGCGCGTGGCCAGCAGCCCCACGCTGTCGGCCAACCTGCTGCCCGACTGCATCGCGCGCTGCCAGCGCGAGCTGCCCGGCGTGCAGGTCATGCTGCTGGACCGCGTGCAGAACGACGTGCTGTCCAGCGTGCTCTCGGGCGAGGTGGATTTCGGCGTGGTCATCGATCCCGGCGACCGCGAGGCGCTGCACTGCGAGCCCGTCTACACCGAGCCATTCGGCCTGGCCTGCCCACCCGCGCACCGGCTCGCGCGCCGGCGCCAGGTACGCTGGACCGATCTGGCGGACGAACCGCTGGTGCTGCTGGACCACGCCTCGGGCAGCCGCCGCCTCATCGACCGCGCGCTGGCCGCTCAGGGCGTGCAGGCCCGGGTGGCGCAGGAGGTGGGCCATGCCACCACGATCTTCCGCATGCTCGACGCGGGCCTGGGCGTGTCGGTCATCCCCATGCTGGCCCTGCCGCCCGAGGGCCTGCCGCAGCTGGCCATACGGCCGCTGCTGCCGCGCGTGGATCGCGACATCGTGCTCGTGCACCGGCGCAACCGCGCGCTCGCGCCGCTGGCGCAGCGCGTGTGGGACCTGGTGCGCGACGTGGCGCACGCGCGCCAGCGCATCACCAGCCCAGCGCCGCGGCCAGGATCAGGCTCGCCTCGGGCGTGA
PROTEIN sequence
Length: 314
MNVTLRQLQVFLSVAATRNFSRTGDQVGLTQPAVSRSITELEAQLGLQLLNRTTREVDLTDAGRSLAVRLPRVLEDLEATLLDVQGMSTALHGRVRVASSPTLSANLLPDCIARCQRELPGVQVMLLDRVQNDVLSSVLSGEVDFGVVIDPGDREALHCEPVYTEPFGLACPPAHRLARRRQVRWTDLADEPLVLLDHASGSRRLIDRALAAQGVQARVAQEVGHATTIFRMLDAGLGVSVIPMLALPPEGLPQLAIRPLLPRVDRDIVLVHRRNRALAPLAQRVWDLVRDVAHARQRITSPAPRPGSGSPRA*