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SCNpilot_expt_500_bf_scaffold_4944_7

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(4170..5114)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXX1_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 314.0
  • Bit_score: 599
  • Evalue 1.90e-168
  • rbh
LysR family transcriptional regulator; K13794 LysR family transcriptional regulator, regulatory protein for tcuABC similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 314.0
  • Bit_score: 599
  • Evalue 6.10e-169
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB86935.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 314.0
  • Bit_score: 599
  • Evalue 2.70e-168

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGGAACTGCGCCAGCTTCGCTACTTCGTCCGCATCGTCGAACTCGGCTCCATGGGCCGCGCCGCGCTGGACCTGGGCATGGTGCAGTCCGCGCTCAGCCAGCAGGTCAGCCGCCTGGAGGGCGAGCTGTGCACCCGGCTGCTGCAGCGCACCGCCAAGGGCGCCGTGCCCACCGAGGCGGGCATGGCCTTCTTCCGCGAGGCGCAGCTGGTGCTGCGCCATGCCGAGCAGGCCGCGCGCGCGGCGCAGCACGCGCGGCTCACGGGCTCGGTCAGCGTGGGGCTGGCGCCCACCACGGCATCGGTGCTCGGCGTGCCGCTGCTGCGCGCCATGCGCGAGCGGCACCCCGACGTGCGCCTGCACATGGTCAGCAGCCTGTCGGGGCACCTGTCGAACATGCTCAACGCGCGCCAGCTCGACCTGGCCGTGCTGTTCGACACCCAGCCCGCGCGCCGCTGGAGCGTGGTGCCGCTGCTGGAGGAGCGGCTGTTCCTGATCCGCTCCGCGCACCGCTCGGCCCGGCCGCTGCCCGCGCCGGGCCAGGGCACGGTACAGCTCGCGCAGCTGGGCGAGGAGCCGCTGATCCTGCCCAGCGGCCCGCACGGGCTGCGCAGCCAGATCGACGCCGCCTTCGCCCACGCGCGCATCGCGCCCCAGGTGGCGCTGGAGATCGACTCGCTGAGCCTGCTCATGGACGCGGTGGACGCCGGGCTGGGCAGCACCGTGCAGCCCTGGGCCGCCGTGGCCGCGTTCGCCGACGCGGGCGAGCGCTTCGTGCTCGCCGAGATCGCCGACGCGCCCGCCTTCCGCCCCTCGGCGCTGTGCAGCCTGTCGGACGACGAGCTCTCGCCCGCGGCGCTGGCCACGCGCGTGGTGCTGGCCGAGTGCTCGCGCACGCTGGTGGGCAGCGGCGCCTGGGTGGGCGCCACGCTGGTGCCGCACTGA
PROTEIN sequence
Length: 315
MELRQLRYFVRIVELGSMGRAALDLGMVQSALSQQVSRLEGELCTRLLQRTAKGAVPTEAGMAFFREAQLVLRHAEQAARAAQHARLTGSVSVGLAPTTASVLGVPLLRAMRERHPDVRLHMVSSLSGHLSNMLNARQLDLAVLFDTQPARRWSVVPLLEERLFLIRSAHRSARPLPAPGQGTVQLAQLGEEPLILPSGPHGLRSQIDAAFAHARIAPQVALEIDSLSLLMDAVDAGLGSTVQPWAAVAAFADAGERFVLAEIADAPAFRPSALCSLSDDELSPAALATRVVLAECSRTLVGSGAWVGATLVPH*