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SCNpilot_expt_500_bf_scaffold_6783_5

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(2414..2950)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUI2_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 170.0
  • Bit_score: 287
  • Evalue 1.20e-74
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 170.0
  • Bit_score: 287
  • Evalue 3.80e-75
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO25313.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 170.0
  • Bit_score: 287
  • Evalue 1.70e-74

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
GTGCGGCTGGCCACGTCCGACGCCTTCGCCAACGAACTCGTGCCGCGCCTGTGCGCGGATTTCCAGCGCACGCACCAGGGCATCCAGTTCAGCGTGCAGGTGCTGCCCACGGCCCAGGTGCCCGGCGCGGTGCGCGGCGGCGCGGCCGACATCGGCCTGTGCTTCAGCCGCGCGCCCGAGAAGGACATCGCCGTGGCCTACCGCCAGAGCGCGCCCGTGCTGGCCCTGCTGCCGCCGGGCCACGCGCTGGCACGCGCGCGCAGCCTCACGCTCGCGCGCATGGCGCGCTACCCGCTGGCCCTGCCCCCGCCCGAGACCACGGTGCGCCAGATGATCGACATCGTCTGCAGCCGCCAGGGCCTGCGCCTGGAACCCGTGCTGGTGAGCAACCATGCCAAGACCATGCTGCACTTCGTGGCGAGCGGCGGCGGGCTGTCGGACCTGCGCGACCTGGAGGTGCAGACCCTCGCGGGCCGCAGCCTGCCCGTGGCGGCGCAGGCATTCCTTGCATTGCTGTGCGAGAGCCTGGCAGGGTAG
PROTEIN sequence
Length: 179
VRLATSDAFANELVPRLCADFQRTHQGIQFSVQVLPTAQVPGAVRGGAADIGLCFSRAPEKDIAVAYRQSAPVLALLPPGHALARARSLTLARMARYPLALPPPETTVRQMIDIVCSRQGLRLEPVLVSNHAKTMLHFVASGGGLSDLRDLEVQTLAGRSLPVAAQAFLALLCESLAG*