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SCNpilot_expt_500_bf_scaffold_7008_5

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: 3357..4298

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377531 similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 311.0
  • Bit_score: 317
  • Evalue 1.10e-83
  • rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJE49427.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 340.0
  • Bit_score: 300
  • Evalue 2.00e-78
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 301.0
  • Bit_score: 262
  • Evalue 1.40e-67

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGCACGGCATTCCCTCTTGCGCAACGCCCGCCGGCGCCGGCGCGCCCGCGCGCTGCGTCGTGACGCCGGGCTGCCTGCCCGCCGAGCCGGCGCTGCGCGCCCACCTGGCGCACACGCGCCGGCTGCGCCCCGGCCTGCTGCTGCACTGGGACGACGCGCACGAGCAGGAGGACCTGATCGCCCAGACCGAGCTCGACGCGGGCCTGCGCATCGTGCTGCTGCTCGAAGGCGCGGTGGACGTTTCCTATGGCCAGCGGCAGGTCGCGCTGTCCAGCGCGCGGGGCGGCGCGAGCGCCGCGCTGGTGGCGCTGGCCGAGCGCGACCAGCTCACGCGCCGCGCGCGCCGGGGCGTGTATTCGCGCCGCGTCAACCTGAACCTGGGCCCGGCCTGGCTCGCGCAGGCCGGCACCGCCTGCGGCGTGCTGGAGGACTTCATGCGCCGCCACCTCGACATGCGGCGCTGGCAGATGTCGCCGCGCGCCGTGGCGATCGCCGAGCAGATCGTGCACCCGCCGCAGCTGGAGCCCCTGCTGCAGAGCCTCTACCTGGAGAGCCGCGCGCTGGAGCTGGCGGGCGAGGCCCTGGCCACGCTGCACCGCCACCCCAGCGCGCTGCGCCCGCGCGAGCACCAGCGCCTGCGCGAGCTGCACGCCTTCCTCGGCTCGGGCCAGGCCGACGGCCTGTCGCTCGACGAGATCGCGCGCCACGCGGGCGTGAACGCCAACACGCTGCAGCGCCAGTTCCGCGCCGTCTTCGGCACCACCGTGTTCGACTACCTGCGCGAATGCCGCCTGCTGCGCGCGCGCCGCGCGCTGGAGCACGACGGCGTCACCGTGGGCCAGGCGGCGATGGTGGCGGGCTACACCAGCGCGGCCAACTTCGCCACCGCGTACAAGAGGCGCTTCGGGCACGCGCCCAAGCTGGCGCGCTCGCGCATCTAG
PROTEIN sequence
Length: 314
MHGIPSCATPAGAGAPARCVVTPGCLPAEPALRAHLAHTRRLRPGLLLHWDDAHEQEDLIAQTELDAGLRIVLLLEGAVDVSYGQRQVALSSARGGASAALVALAERDQLTRRARRGVYSRRVNLNLGPAWLAQAGTACGVLEDFMRRHLDMRRWQMSPRAVAIAEQIVHPPQLEPLLQSLYLESRALELAGEALATLHRHPSALRPREHQRLRELHAFLGSGQADGLSLDEIARHAGVNANTLQRQFRAVFGTTVFDYLRECRLLRARRALEHDGVTVGQAAMVAGYTSAANFATAYKRRFGHAPKLARSRI*