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SCNpilot_expt_500_bf_scaffold_7008_7

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(5125..6831)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM5_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 568.0
  • Bit_score: 1117
  • Evalue 0.0
  • rbh
Fis family sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 568.0
  • Bit_score: 1117
  • Evalue 0.0
  • rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEB82697.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 568.0
  • Bit_score: 1117
  • Evalue 0.0

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGCCCACCCTTCCCGCGCTGCCCACCGACGCCGACCTGCGGCGCCAGATCCAGTTCTCGGCGGCGGACGGGCGCATCTGGCTGGCGGGCCAGCGCATGGTGCTGATGCACGCCGCTTCGCTGGGCATACTGCGCCGCGAACTCATGCACACCCTCGGCCCCGCGGCCACGCGCCGCCTGCTGCTGCGCGTGGGCCATGCCTCGGGCGAGCGCGACGCGGCGCTGGCGCGCCAGCTGCGCCCCGGCGCCGACGCCTTCGCCATGTTCAGCGTGGGCCCGCAGCTGCACATGCTGCAGGGGGCCGTGCAGGTCACGCCCGAGAAGCTGGAGCTGGACGCGGCCACCGGCCACTTCCACGGCATCTTCGCCTGGCAGCAGTCGTGGGAGGTGGAAGTGCACGTGCGCGACTTCGGCCCGCAAAGCGCCCCCGTGTGCTGGATGCTGCTGGGCTACGCATCGGGCTACACCAGCGCCTTCATGGGCCGCACCGTGCTCTACAAGGAGGTGCAGTGCGCCGCCGGCGGCCACGCGCACTGCCGCATCGAGGGCCGCCCGGTGCAGGACTGGCCCGACGGCGCGCAGCTGGCCGCCGACTACGCGCCCGACGCGCTGCCGGACGGCGGCGCGCCCCAGGACGGCCCGCGCGCCCTGCCCGCCTGGCCCGCGCCCATGCCCGCCGAGGACCGGCCCGAGCCGCCCGCCGACGCGCTGGGCCCGCTGATCGGGCGCTCGGCCGGCTTCACCGCCGCCACGCGGCTGCTGCGCAAGGCCGCGGGCACGCAGGTCACGGTGCTGCTCACGGGCGAGACCGGCGTGGGCAAGGAGCGCTTCGCGCGCGCCCTGCACGCTTTGAGCCCGCGCGCGGCCAAGCCCTTCGTGGCGGTGAACTGCGCGGCGCTGCCGGGCAGCCTGGTCGAGTCCGAGCTCTTCGGCACCGAGAAGGGCGCCTACACCGGCGCCGACGCGGCGCGCGCCGGGCGCTTCGAGCGCGCGCACGGCGGCACGCTGTTCCTCGACGAGCTGGGCGAGCTGCCGCTGTCCGCCCAGGCCAAGCTGCTGCGCGTGCTGCAGGACGGGCAGGTCGAGCGCCTGGGTGCCACCCAGCCGCGCCAGGTGGACGTGCGCCTGGTGGCCGCCACGCACGTGGACCTGCAGGACGCGGTGCGCGCCGGGCGCTTCCGCCAGGACCTGTACTACCGCCTGAACGTCTACCCCATCCGCATCCCGCCGCTGCGCGAGCGCCAGGACGACATCGAGCCCTTCGCGCGGCACCTGCTGCAGCGCTTCGCGGCGCTGCACGACAAGCACATCGGCGGCCTCACGGACCGCGCGCTGCACGCGCTGCGCCAGTACGCCTGGCCGGGCAACGTGCGCGAGATGGAGAACCTGATCGAGCGCGGCGTGATCCTGGCCGACCCGGGCCAGCCCGTGGACGCGGCGCACCTGTTCCCCGACAGCGCCCCGGCGGCCGCGCCCGCGCACACGCTGCAGGCCTCGGGCCGCCTGGGCGAGGCCCGCGCCCCGGCCTGCGACGCGGCGCTGATCGACCGCCTGCTGGGCGAGCGCCTGGACCTGCAGGCGCTGGAGACCCACCTGATCGAGGCCGCCGTGGAGCGCAGCCACGGCAACCTGGCGGCGGCCGCGCGCCTGCTGGGCCTGACGCGCCCGCAGCTGAGCTACCGGCTGAACAAGGTGCGGGATATCTGA
PROTEIN sequence
Length: 569
MPTLPALPTDADLRRQIQFSAADGRIWLAGQRMVLMHAASLGILRRELMHTLGPAATRRLLLRVGHASGERDAALARQLRPGADAFAMFSVGPQLHMLQGAVQVTPEKLELDAATGHFHGIFAWQQSWEVEVHVRDFGPQSAPVCWMLLGYASGYTSAFMGRTVLYKEVQCAAGGHAHCRIEGRPVQDWPDGAQLAADYAPDALPDGGAPQDGPRALPAWPAPMPAEDRPEPPADALGPLIGRSAGFTAATRLLRKAAGTQVTVLLTGETGVGKERFARALHALSPRAAKPFVAVNCAALPGSLVESELFGTEKGAYTGADAARAGRFERAHGGTLFLDELGELPLSAQAKLLRVLQDGQVERLGATQPRQVDVRLVAATHVDLQDAVRAGRFRQDLYYRLNVYPIRIPPLRERQDDIEPFARHLLQRFAALHDKHIGGLTDRALHALRQYAWPGNVREMENLIERGVILADPGQPVDAAHLFPDSAPAAAPAHTLQASGRLGEARAPACDAALIDRLLGERLDLQALETHLIEAAVERSHGNLAAAARLLGLTRPQLSYRLNKVRDI*