ggKbase home page

SCNpilot_expt_500_bf_scaffold_13399_1

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(2..757)

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxy-2-methylbutyryl-CoA dehydrogenase (EC:1.1.1.178) similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 252.0
  • Bit_score: 477
  • Evalue 2.10e-132
  • rbh
Short-chain dehydrogenase/reductase SDR n=2 Tax=Alicycliphilus denitrificans RepID=E8TS89_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 252.0
  • Bit_score: 477
  • Evalue 6.80e-132
  • rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:GAO25856.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 252.0
  • Bit_score: 478
  • Evalue 4.30e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGAAACTGCAACAAGGAATGACCGCCCTCGTGACCGGCGGCGTCTCGGGCCTGGGCGAGGCCTCGGCCATCGCCCTGCTCGAACGCGGCCTGAACGTCGTCGCGGTGGACCTGAACGACGAGCGCGGCCAGGCCATGGAGCAAAAGCATGCCGGCCGGCTGCGCTACGTGAAGGCCGACGTCTCCGACGAGGCCCAGATGCAGCAGGCCATCGCGGCGGCCGAGGCCTTCGGCAACTTCCGCGCGCTGGTGCACTGCGCCGGCATCGGCGGGCCGGTGCGCCTGGTCGAGAAGGACGGCAGCCCCGGCTCGCTGGAGAAGTACGTGAACATCATCCGCGTGAACCAGATCGGCACCTTCAACACGCTGCGCCTGGCCGCCGCGAGCATGGCCAGGAACGAGCCCCTCGACGGCGAGCGCGGCGCCTGCGTGCTCACCGCCTCGGTGGCGGGCTACGAGGGGCAGATCGGCCAGATCCCCTACGCCTCGTCCAAGGCCGGCGTGATCGGCATGACCATCGTCGCGGCGCGCGACCTGGCGTCGAAGTTCATCCGCGTGTGCACCATCGCGCCGGGCCTGTTCGACACGCCCATCCTGGCCAAGCTGCCCGAGAACGTGCGCCAGTCGCTGGCCGCCTCCGTGCCCAATCCGGCGCGCCTGGGCCACCCCTCGGAATACGCGATGACCGCGCTGCACATCCTCGAGAACCCCATGCTCAACGGCGAGACCATCCGGCTCGATGGCGCCATCCGCATG
PROTEIN sequence
Length: 252
MKLQQGMTALVTGGVSGLGEASAIALLERGLNVVAVDLNDERGQAMEQKHAGRLRYVKADVSDEAQMQQAIAAAEAFGNFRALVHCAGIGGPVRLVEKDGSPGSLEKYVNIIRVNQIGTFNTLRLAAASMARNEPLDGERGACVLTASVAGYEGQIGQIPYASSKAGVIGMTIVAARDLASKFIRVCTIAPGLFDTPILAKLPENVRQSLAASVPNPARLGHPSEYAMTALHILENPMLNGETIRLDGAIRM