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SCNpilot_expt_500_bf_scaffold_16292_2

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: 1844..2203

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 118.0
  • Bit_score: 235
  • Evalue 8.80e-60
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 118.0
  • Bit_score: 235
  • Evalue 3.90e-59
Formamidopyrimidine-DNA glycosylase n=2 Tax=Alicycliphilus denitrificans RepID=E8U100_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 118.0
  • Bit_score: 235
  • Evalue 2.80e-59

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGCCCATCAAGCAGTTGCTGCTGGCGGGCCGGGTGGTCGTCGGCGTGGGCAACATCTACGCGTGCGAGGTGCTGTTCCTGGCGCGCATCAGGCCGACGGTGCGCGCCAGCGCCATAGGCCCGCAGCGCGCGCGGCGCCTGCACGGCGCGATCCGCGAGGTGCTGGCGCGGGCCGTGGAGCGCGGCGGCAGCACGCTGCGGGATTTCTCCGGCGTCGACGGCAATGCCGGGCATTTCCAGGCCGAGGCCAACGTCTATGGGCGCGAGGGCCTGCCGTGCAGGCAATGCGGCACGCCCGTGCGCCTGCTGCGCCAGGCGCAGCGAAGCACTTACTTCTGTCCGAACTGCCAGCGGCCCTAG
PROTEIN sequence
Length: 120
MPIKQLLLAGRVVVGVGNIYACEVLFLARIRPTVRASAIGPQRARRLHGAIREVLARAVERGGSTLRDFSGVDGNAGHFQAEANVYGREGLPCRQCGTPVRLLRQAQRSTYFCPNCQRP*