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SCNpilot_expt_500_bf_scaffold_17931_1

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(1..408)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D2G8_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 136.0
  • Bit_score: 223
  • Evalue 1.30e-55
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EFI62675.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 136.0
  • Bit_score: 223
  • Evalue 1.80e-55
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 136.0
  • Bit_score: 218
  • Evalue 1.30e-54

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCCTTCCTCTTCCAGCCTCCCGCACCGCGACATCACCGCCCTCTACACCACCCACCACGGCTGGCTGCAGGGCTGGCTGCACCGCCGGCTCGGCAATGCCTTCGACGCTGCCGACCTCGCGCAGGACACCTTCGTGCGCATCCTGGGCGTGCGCGATCCGCAGGCCATCGAAACGCCCCGCGCCTACCTGACCACGGTGGCCAAGGGCGTGCTGGTCAACTGGTGCCGGCGCCAGGCGCTGGAGCGCGCCTACCTGGAGGCGCTGGCCCTGCTGCCCGCGCCGGAGGCGCCGTCGCCCGAGCAGCGCGCCGTGGTGCTGGAGACCCTGTACGGGATCGACGCCATGCTCGATGCGCTGCCGCCGCTGGCGCGGCGCGCGTTCCTGCTGTCGCAGCTCGACGGCATG
PROTEIN sequence
Length: 136
MPSSSSLPHRDITALYTTHHGWLQGWLHRRLGNAFDAADLAQDTFVRILGVRDPQAIETPRAYLTTVAKGVLVNWCRRQALERAYLEALALLPAPEAPSPEQRAVVLETLYGIDAMLDALPPLARRAFLLSQLDGM