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SCNpilot_expt_500_bf_scaffold_17152_1

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(3..752)

Top 3 Functional Annotations

Value Algorithm Source
ribosome small subunit-dependent GTPase A; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 250.0
  • Bit_score: 482
  • Evalue 6.60e-134
  • rbh
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 250.0
  • Bit_score: 482
  • Evalue 3.00e-133
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Alicycliphilus denitrificans RepID=E8TQ38_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 250.0
  • Bit_score: 482
  • Evalue 2.10e-133
  • rbh

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGCTGAGGCGCCCGCGCACCTGGAAGGCCTGGTCGTGGCCAGCCACGGCCGCCACTGCGTGGTGGAGAGCGCCGACGGCCAGCGCCGCATCTGCCACCCGCGCGGCAAGAAGAGCCAGGCCGTGGTCGGCGACCGCGTGCTGTGGCGGCCGGCCGCGCCGGGCCAGGGGCGCGGCCAGGGCGACGAGGGCACGATCGAGCGCGTGCAGGAGCGGCGCAACCTGTTCTACCGCCAGGACGAGGTGCGCACCAAGTCCTTCGCCGCCAACCTGGACCAGGTGCTGATCCTGATCGCGGCCGAGCCCGTGTTCTCCGAGAGCCAGCTCGTGCGCGCGCTGATCGCGGCCGAGGCCGCGCAGATCACGCCGCTGATCGCGCTCAACAAGAGCGACCTGGTCGAACCCTTCGCGCGCGCCTGGGAGCGCCTGTGGCCCTACCGCCACATGGGCGGCGAGCAGGACACAAAACACCACTACCGCGTGCTGCCGCTGTCGCTCACCGAATCGGGGCCGGTGGACCGCGAAGCACTGCTGCCGCTGCTGGCGGGCAAGACCACGCTGGTGCTGGGCCCCTCGGGCTCGGGCAAGAGCACGCTGGTGAACCTGCTGGTGCCGCAGGCAAAGGCGCAGACGGGCGAGATCTCGCAGGCCCTCAACTCGGGCCGGCACACCACGACCAGCACCCAGCTGTACTGGATCGACGCGGAGCGCACCACGGCGCTCATCGACTCGCCGGGCTTCCAGGAATTC
PROTEIN sequence
Length: 250
MAEAPAHLEGLVVASHGRHCVVESADGQRRICHPRGKKSQAVVGDRVLWRPAAPGQGRGQGDEGTIERVQERRNLFYRQDEVRTKSFAANLDQVLILIAAEPVFSESQLVRALIAAEAAQITPLIALNKSDLVEPFARAWERLWPYRHMGGEQDTKHHYRVLPLSLTESGPVDREALLPLLAGKTTLVLGPSGSGKSTLVNLLVPQAKAQTGEISQALNSGRHTTTSTQLYWIDAERTTALIDSPGFQEF