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SCNpilot_expt_500_bf_scaffold_3006_5

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 3718..4407

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUQ1_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 198.0
  • Bit_score: 207
  • Evalue 1.60e-50
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 198.0
  • Bit_score: 207
  • Evalue 4.90e-51
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY13941.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 198.0
  • Bit_score: 207
  • Evalue 2.20e-50

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Taxonomy

Haliangium ochraceum → Haliangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGCTCGGCGGCCGCAGCGAGCGCGTCGTTCAGCAGGTGCTCGTAGCCACCGTCGCCGAGCTGGCCGAGTCCGGCTACAGGGCGTTTCGCATGGACGCGGTGAGCGCGGCGGCGGGGGTGAACAAGACCACGATCTACCGGCGCTGGCCCGGCAAGAAGCCGCTGGTGGCGGCCACCGTCGACTGGATGCGCAGGTTCGTGCATGACGTGCCGTTGCCCGACACGGGCTCGCTCGAGCAGGATCTCGCCGAGGCCTTCCAGCGCAGGGTGAGCTTCAAGGACCGCATCGAGGGACGGGCGTGGGCTCGGTTGCTCGCGGAGAAGCACGACCCCGAGGTCAGCGCCGTCACCGATGACGCCGTCAAGGAGCGCAGCGGCGCTTGGTACGCGATGGTTACGCGGGCCGTCGCGCGTGGCGAGCTCCCCGAGGGCACCGACCCGCAGCTGTTGCTGGGGATGCTCGGGGCGGTCGTCGACGCGTGGTACGCGAGGTCGCCAGGCAAGCTGACAGCCGAGCTGCTCGAGGCTGCCGTGCGCACCATCGTTGCCGGCGCGCGCTCGGGTTCGCTGGTTCGCTCCAACGGGGAGCGCCGGACCGTGCGCGCACGGCCACGGATGGCGACGGACGCGACCGGGTCGACCCGTCATCGGCGCCAGGGTGGCGAAAGCTCGATCAAGAACCGAAAATGA
PROTEIN sequence
Length: 230
VLGGRSERVVQQVLVATVAELAESGYRAFRMDAVSAAAGVNKTTIYRRWPGKKPLVAATVDWMRRFVHDVPLPDTGSLEQDLAEAFQRRVSFKDRIEGRAWARLLAEKHDPEVSAVTDDAVKERSGAWYAMVTRAVARGELPEGTDPQLLLGMLGAVVDAWYARSPGKLTAELLEAAVRTIVAGARSGSLVRSNGERRTVRARPRMATDATGSTRHRRQGGESSIKNRK*