ggKbase home page

SCNpilot_expt_500_bf_scaffold_3006_13

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(10589..11353)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 175.0
  • Bit_score: 217
  • Evalue 2.40e-53
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNY6_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 175.0
  • Bit_score: 217
  • Evalue 1.70e-53
16S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 175.0
  • Bit_score: 217
  • Evalue 5.30e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGAGCGGTCAGGCGCAGCTCGCCCTCCCGGGACTTGCGGCTGAATCGTCCGCAGAATGGGTGTGGAGCGAAGAGACCGGAGAGGAGACTGACGTGCCTGCCTTCGTCCACGAGACCGTGATGCGCGCGCCGGTGGTGAACGCGCTTGCGCCTTCCGCCGGCGTCTACGTCGACGCGACGGTGGGGGGCGGCGGTCACACCGAAGGGATCCTCGAGGCTCATCCGGAAGCCCGGGTGATCGCGCTCGATCGTGACGAGATCGCGCTCGCGGCCGCCAAGGAGCGGCTCGCTCGCTTCGGCGATCGTGTGACCTTCGTCAAGACGCCGTTCGGCGAGGTCGTCGCGGCGCTCGCGTCTGCCGGGCTCACCCAGGTCGACGGCCTCTGCGCGGACCTCGGCGTGAGCTCTCCGCAGCTCGACGAGGCGGCGCGCGGAATGAGCTTCCGCCGCGAGGGGCCGATCGACATGCGGATGGACCGCTCCAGTGGCGAGACGGCGCTCGAGCTCGTGGAGCGGCTCTCCGACGACGAGCTGGCGGACATCATCTTCCACTACGGCGAGGAGAAGCGCTCGCGGCGCATCGCTCGCAGCGTGAAGCGCGCGCTGGCAGAAGGACAGCTCGCGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCTGCTCGGCGCGCTCCCCGACATCATCCGGGTCGACGGGCGCGTCGCCATCCTCAGCTTCCACTCCCTCGAGGACCGCCTCGTGA
PROTEIN sequence
Length: 255
MSGQAQLALPGLAAESSAEWVWSEETGEETDVPAFVHETVMRAPVVNALAPSAGVYVDATVGGGGHTEGILEAHPEARVIALDRDEIALAAAKERLARFGDRVTFVKTPFGEVVAALASAGLTQVDGLCADLGVSSPQLDEAARGMSFRREGPIDMRMDRSSGETALELVERLSDDELADIIFHYGEEKRSRRIARSVKRALAEGQLATXXXXXXXXXXXXXXXXXRCSARSPTSSGSTGASPSSASTPSRTAS*