ggKbase home page

SCNpilot_expt_500_bf_scaffold_9843_7

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 7162..7899

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FIF3_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 246.0
  • Bit_score: 365
  • Evalue 4.80e-98
  • rbh
Formate hydrogenlyase transcriptional activator {ECO:0000313|EMBL:EYF02366.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 246.0
  • Bit_score: 369
  • Evalue 4.70e-99
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 246.0
  • Bit_score: 365
  • Evalue 1.50e-98
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCACGCGCACCTCCTCGTCGTCGACGACGAGCCGTCGATCCTCACGACCCTGCAGAAGGCCCTCACGCTCGAGGGCTACTCGGTGGACGTCGCGGGCGGCGTGAAGGTCGCAGACGAGAAGCTCAAGAAGCGAAGCTACGACCTCTGCCTCTTCGACGTGCAGCTCCCCGACGGCGACGGGATCACGCTCCTCGCGCAGATCCGCGCCGCGAAGAACGAGGTGCCCGTCATCATGATGAGCGGGCATGCGACCATCGACACGGCGGTGAAGGCGACGCGCCTCGGCGCGCTCAACTTCCTCGAGAAGCCGATCAACACCGATGCGCTCCTCATCGCAGTCGAGACGGCGCTCCGCCTCCAGCGAGCGGAGACCGAGGCCCGCGAGCTCCGCGTCGCGAGCGGCACCACTGGCGAGCTCGTCGGTGAGAGCGGCCCGATCAAGAAGCTCGTCGAGCAAATCGCGCGCGCAGCGAAGAGCTCTGCCAGCGTGCTCGTCACCGGCGAGCGCGGCACCGGCAAGGAGCTCGTCGCCCGCGCAATCCACCAGCTCTCGCCGCGCGCGAAGGGACCGCTCGAGAAGCTGAACTGCGCTGCGCTCCCGAGCGAGCTCATCGAGAGCGAGCTCTTCGGCCACGAGGCGGGCGCCTTCACCGGCGCGACGAAGCAGCGCCGCGGCAAGTTCGAGCGCGCGAGCGGCGGCACGCTGTTCCTCGACGAGGTCGGCGACATGCCG
PROTEIN sequence
Length: 246
MPHAHLLVVDDEPSILTTLQKALTLEGYSVDVAGGVKVADEKLKKRSYDLCLFDVQLPDGDGITLLAQIRAAKNEVPVIMMSGHATIDTAVKATRLGALNFLEKPINTDALLIAVETALRLQRAETEARELRVASGTTGELVGESGPIKKLVEQIARAAKSSASVLVTGERGTGKELVARAIHQLSPRAKGPLEKLNCAALPSELIESELFGHEAGAFTGATKQRRGKFERASGGTLFLDEVGDMP