ggKbase home page

SCNpilot_expt_500_bf_scaffold_11804_11

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(12373..12930)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingomonas sp. S17 RepID=F3WUE6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 182.0
  • Bit_score: 227
  • Evalue 1.60e-56
Hemolysin secretion protein D {ECO:0000313|EMBL:EZP66672.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 178.0
  • Bit_score: 228
  • Evalue 5.70e-57
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 183.0
  • Bit_score: 222
  • Evalue 1.60e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
AGCCTCGGCCAGTATCTCAATCCCGGCGACGCCATCGCCACGTTGGCCGACATCGACCAGCTGCTCGTCGACTTCAGCCTGCCCCAACAGGAGCTGGCCCAGGTGCGTGTCGGCGCCACGGTACGCATCACTACGGACGCCTTCCCCGAGCGCAGCTTCACGGCGAAGGTCAACGCCGTCGAGCCGCGGATCAATCCGGACACGCGCAATCTCCAGGCCCAGGCGGTGCTCGCCAACGGCGACGGTGCGCTGCGCCCGGGCATGCACGTGAACGTTGCCCTGGAGCTGCCGCCCGGACGCGAAGCGCTCGTCCTGCCGGCCACGGCTGTCCAATCGTCGTCCACCGGAGACAGCGTGGTGGTGGTGCGAGGCGACCAACCCGAACACGCCGGCACCGCCGAGGTCCTGTCCGTCACGATCGGTCGGCGCATCGGCGACCGAGTCGTCGTCGTGCAAGGACTCGAGCCTGGCGCCGTGGTGATCACCGAAGGGCAATTGCGTGTCCAACCCGGAATGCGCGTTCAGGTCACGCGCGGCGCCGATGCGGGGGCGCGCTGA
PROTEIN sequence
Length: 186
SLGQYLNPGDAIATLADIDQLLVDFSLPQQELAQVRVGATVRITTDAFPERSFTAKVNAVEPRINPDTRNLQAQAVLANGDGALRPGMHVNVALELPPGREALVLPATAVQSSSTGDSVVVVRGDQPEHAGTAEVLSVTIGRRIGDRVVVVQGLEPGAVVITEGQLRVQPGMRVQVTRGADAGAR*