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SCNpilot_expt_500_bf_scaffold_12703_6

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(2674..3039)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 121.0
  • Bit_score: 142
  • Evalue 4.60e-31
RNA-splicing ligase RtcB n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4J0_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 105.0
  • Bit_score: 71
  • Evalue 9.30e-10
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 105.0
  • Bit_score: 71
  • Evalue 2.90e-10

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGTCCAAGGCACGCGCTCTCCTCGAAAACGAGAACGACTGGAAGCGGCGCGCCGAGTGGGTGGACGGCGCGGAGGGCGGCTACTTCCGCCTCGAGACCGCCGACACCGGCGAGGTGCCGGTTCGTCTCTTCGTCACGCCGAAGCTCCTCGGCGAGGCCGAGCCCACGCTCTATCGGCAGGTCGTCAACGCGACGCGCTTCCCGGGCGTGAAGCTCGTGTGCGTCACGCCGGACGTCCACTACGGCTACGGCGTGCCCGTCGGTTGCGTCATCCTCACCGATCGCAACGAGGGCTCCATCGCCCCGCCGAGCTCGCAACGCCCGACCGGAAGCTCGCGTTCAACCGCGAGGTCTCGAATCGCGTGA
PROTEIN sequence
Length: 122
MSKARALLENENDWKRRAEWVDGAEGGYFRLETADTGEVPVRLFVTPKLLGEAEPTLYRQVVNATRFPGVKLVCVTPDVHYGYGVPVGCVILTDRNEGSIAPPSSQRPTGSSRSTARSRIA*