ggKbase home page

SCNpilot_expt_500_bf_scaffold_13849_5

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(3530..4261)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EUN1f RepID=D3CVC7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 28.2
  • Coverage: 248.0
  • Bit_score: 76
  • Evalue 4.40e-11
Uncharacterized protein {ECO:0000313|EMBL:KFA94207.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 75.0
  • Bit_score: 95
  • Evalue 1.30e-16
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 124.0
  • Bit_score: 66
  • Evalue 1.40e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cystobacter violaceus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
GTGCTGTTCGGGCTCGCGGGGCTCGAGCGTCGCGAGTCCGAGGGTGAGTTCACGCAGGCTGACGTCGAGAAGCTCGAGGCCCTCGGTCCCTTCGTCGCAGCCGGTGCCCGCGTGCAGATCGCCTACGATGAGCTGTCGCGCGAGGCGGCCGCGCTCCGAGCCTTCAGCAAGGTGAGCGGCACGCTCTTCGTCGTCGACCGCGAGCGCAAGAAGGTCATCTGGGCCGCGAACCGCGACCGCGGCATCGAGTGGGAGTCCGACGTCACACCCATCGAGGAGCACGTCGTCGATGCAGCCGAGCAGTCGCTCGAGGCGCGAGCGAAGCAAGAGGCGCTTCCGACTCCGCCGCGCCTCCCGTCCGGCGCGGTCGTGGCGGTGGCGAAGATCGAGGGCGATCCCGTCTTCAACAACGCGAAGTGCGCGATCCTCCGGGTCGAGCCGCAGGAGAAGGCCGCACCCATCGAGGGGCTCAGCAAGCGGGAGCGCGAGATCGCTCGACTGCTGGTCGCGGGTTACAGCGGCGTGAACGTGGCTGCGATCTCCGGCCTGTCGGAGAACACGGTCCGCACCTACGTCCGGCGCCTCTATCAGAAGCTCGGCGTCGCGAATCGCGCGGACCTCGTGCGCAAGCTGATGTCGCCAGCCGAGGTGAAGTCGAGCGTGGCTCCGTCGTCGGTCATCTCGCCGCCGCCGGACTCGTCGCTGGCCCACGGCGACGACACGCTGGACTGA
PROTEIN sequence
Length: 244
VLFGLAGLERRESEGEFTQADVEKLEALGPFVAAGARVQIAYDELSREAAALRAFSKVSGTLFVVDRERKKVIWAANRDRGIEWESDVTPIEEHVVDAAEQSLEARAKQEALPTPPRLPSGAVVAVAKIEGDPVFNNAKCAILRVEPQEKAAPIEGLSKREREIARLLVAGYSGVNVAAISGLSENTVRTYVRRLYQKLGVANRADLVRKLMSPAEVKSSVAPSSVISPPPDSSLAHGDDTLD*