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SCNpilot_expt_500_bf_scaffold_22454_3

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 1832..2518

Top 3 Functional Annotations

Value Algorithm Source
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:AKF02928.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.6
  • Coverage: 219.0
  • Bit_score: 86
  • Evalue 5.60e-14
czcB1; CzcB family heavy metal efflux protein; K15727 cobalt-zinc-cadmium resistance protein CzcB id=24403793 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 30.5
  • Coverage: 187.0
  • Bit_score: 85
  • Evalue 6.90e-14
RND family heavy metal efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 30.0
  • Coverage: 207.0
  • Bit_score: 84
  • Evalue 3.70e-14

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
GTGACGAAACGCCCCTCGCCCACGCGCTGGATCGTCGGCGGGCTCGGTCTGACTCTCCTCATCGGCGCCGCCGCCGCCTACAAGACGAGGAGCGCCAAGCCGAGTCCCGGTGTGGAGGTGCACCGCGACGTCCCGCACCTCGAGGGAAACACGATCGTGTTCTCTCCAGCGTTTCGCGATCGTGCCGCGATCGCCTTCGCGAAGGCGGAGCGCGTTCCCTTCAAGCCGATGGTCCGTGTCGTCGGCACGGTGTCGTTCAACCCGAGCTACGTCGCGGCGATCGGGACGCGTCTCCGCGGCACCGTCCGGCGCACCTTCAAGTACGAAGGAGACCGGGTCGCGCCGAACGAGGCGCTCGCCGAGGTCGAGAGTGCCGAGCTCGGCGAGGCGCAGGCAACGATCGCGCAGGCCGAGGCGACGCAGAAGGCCGCCGAGATGCACGCTCGCCGGGAGCAGGAGCTCCTCGACAAGGGCCTCACGACCGCGCGCGAAGCCGAGGTGGCGAGCAGCGAGCTCGCGACCTCCCGAGCCAGCCTGTTGGCGGCACAGCAGCGCGTGAAGGCGTTCGGCGGCAACGGCGCCTTCGGTCTGTTCGTCCTCCGGACACCGATCGGCGGTCACATCGTGGAGCGCCACATCTCACCGGGGCAGTCCGTCGACAGCAATGTCGTCGGCTACAAGGTCGCC
PROTEIN sequence
Length: 229
VTKRPSPTRWIVGGLGLTLLIGAAAAYKTRSAKPSPGVEVHRDVPHLEGNTIVFSPAFRDRAAIAFAKAERVPFKPMVRVVGTVSFNPSYVAAIGTRLRGTVRRTFKYEGDRVAPNEALAEVESAELGEAQATIAQAEATQKAAEMHARREQELLDKGLTTAREAEVASSELATSRASLLAAQQRVKAFGGNGAFGLFVLRTPIGGHIVERHISPGQSVDSNVVGYKVA