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SCNpilot_expt_500_bf_scaffold_20432_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(3..590)

Top 3 Functional Annotations

Value Algorithm Source
yqcB; pseudouridylate synthase/tRNA pseudouridine synthase C (EC:4.2.1.70); K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26] similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 172.0
  • Bit_score: 181
  • Evalue 1.90e-43
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035CB350 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 186.0
  • Bit_score: 182
  • Evalue 4.60e-43
tRNA pseudouridine synthase C {ECO:0000313|EMBL:EYF03407.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 181.0
  • Bit_score: 197
  • Evalue 1.50e-47

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGCCCGTGCCCGCCCCCGAAGGAGCGCCGTCCGCGTCTGCGGCCCCGTGCACGAACACGGAGCCGCGGCCGATCACGCTGCTCTACGTCGACGATGACGTCGTCGTGGCCGACAAGCCGTCGGGCCTGCTCGTCCATCGCGGCTGGGACAACGACGACGACGTCGCGATGTTCCGCGTCCGCGACGCGCTCGGCGCGTACGTCTACCCGATCCATCGCCTCGATCGCGGCACGAGCGGCGCCCTCCTCTTCGCCCGAACCCAAGAGGCCGCCGCCGCGCTCCACGCCTCCTTCGAGGCGCGCCAGGTCGACAAGCAATACCTCGCGCTCGTCCGCGGTCACGCTCCCGAGAGCGGCGTGATCGATCACCCGGTCCCGAAGTCGGAGGACGGCCCGCGGGTCCCTGCGCTCACGCGCTTCGAGCTCGTCGCGCGCTCACCCGTCGATCGCTGCTCGCTCGTCCTCGCGCGGCCGGAGACCGGACGCCTCCATCAGATCCGGCGCCATCTCCGTCACATCAACCATCCGCTCGTCGGCGATGTCGCCCACGGCTCCGGTGTCATCAACCGCCACTACCCAGCGACGTAC
PROTEIN sequence
Length: 196
VPVPAPEGAPSASAAPCTNTEPRPITLLYVDDDVVVADKPSGLLVHRGWDNDDDVAMFRVRDALGAYVYPIHRLDRGTSGALLFARTQEAAAALHASFEARQVDKQYLALVRGHAPESGVIDHPVPKSEDGPRVPALTRFELVARSPVDRCSLVLARPETGRLHQIRRHLRHINHPLVGDVAHGSGVINRHYPATY