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SCNpilot_expt_500_bf_scaffold_21127_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(2..1168)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=1 Tax=Pseudomonas aeruginosa VRFPA01 RepID=V4QGH2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 390.0
  • Bit_score: 366
  • Evalue 2.60e-98
  • rbh
type 4 fimbriae expression regulatory protein PilR similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 384.0
  • Bit_score: 366
  • Evalue 1.40e-98
  • rbh
Type 4 fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:ABR84419.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 384.0
  • Bit_score: 366
  • Evalue 6.30e-98

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGGCACGGCCTGTGGTCTCTAGCGTGGCATTGCAGTCACGCATTCTGGTTGTCGAAGATGATGCGGCAACACGCCACGGCGTCGCCGCGACCCTGCGTGCCCGTGGCCATGAGGTGCTCGAGGCCGGGACCTGCCGTGAGGCCCTCGCGCATTTCTCGTCCCCGCCCGACGCCGTGATCACGGACCTCCGGTTGCCGGACGGCGACGCGGTGAACCTGCTCCCGCAGCTGCGCGACCTCGATGCGACGATCCCGGTCTTCATCATCACCGGCTTCGCGACGATCGACATTGCCGTGCGCGCGGTGAAGCTCGGTGCGGAAGAGTTCTTCACCAAGCCAGTCGCAATGGAGACGCTCCTCGCGTGCGTCGACAACGCGGTTGCACGAAAACAGACGACGCGGACGGGACAGCACAAGCGTGCGACGCTCGAGGCGCGCTCGGACGTGATGCGACGACTCGAAGACGAGGTCGAACGCCTGCGCAACTCCGATTGCGCCGTCCTCATCCTCGGTGAGACCGGCACCGGCAAGAGCATGCTTGCCCGGCACATCCACGAGCTCGGCGCCCGCAGGAACGGTCCCTTCGTCGACGTGAACTGCGCCGGCCTGAGACACGACTTCATCGAGAGCGAGCTCTTCGGCCACATGCGCGGCGCGTTCACCGGAGCGCACACCCAGAAGCAGGGGCTCTTCGACGCGGCGAACGACGGCACGCTCTTCCTCGACGAGATCGGCGACATCGACCTGCAGGTGCAGCCGAAGATCCTCAAGGTGCTCGAGGAGAAGCGCTTTCGCCGCATGGGCGAAGTGCGCGAGCGAAACGCGGACGTCCGGCTCATCGCGGCCACGCACCACGACCTCCTCGCCAGCGTGGAGCGAAAGACGTTTCGTGCGGACCTCTTCTACCGCATCAGCACCGTGACCCTCCGCGTCCCGTCCCTACGCGAGCGCGCGGCCGACCTTCCTCAGCTCGTGAAGGAGCTCCTCGCGCAGGAAGGGACCTCCGACGTGGAGCTCACACGCGGGGCCTGGGATAGACTGTCCGCCTACGCCTGGCCTGGGAACATCCGCGAGCTGAAGAACGTGGTTCATCGGGCGCTGATCCTCCGCAGCGGCGCCGTCATCACGGCGGAAGACGTTCATTTCGACAGCGAGAGCCCGAACGCC
PROTEIN sequence
Length: 389
MARPVVSSVALQSRILVVEDDAATRHGVAATLRARGHEVLEAGTCREALAHFSSPPDAVITDLRLPDGDAVNLLPQLRDLDATIPVFIITGFATIDIAVRAVKLGAEEFFTKPVAMETLLACVDNAVARKQTTRTGQHKRATLEARSDVMRRLEDEVERLRNSDCAVLILGETGTGKSMLARHIHELGARRNGPFVDVNCAGLRHDFIESELFGHMRGAFTGAHTQKQGLFDAANDGTLFLDEIGDIDLQVQPKILKVLEEKRFRRMGEVRERNADVRLIAATHHDLLASVERKTFRADLFYRISTVTLRVPSLRERAADLPQLVKELLAQEGTSDVELTRGAWDRLSAYAWPGNIRELKNVVHRALILRSGAVITAEDVHFDSESPNA