ggKbase home page

SCNpilot_expt_500_bf_scaffold_9759_2

Organism: SCNPILOT_EXPT_750_P_Chlamydiae_37_5_partial

partial RP 32 / 55 MC: 1 BSCG 31 / 51 MC: 2 ASCG 9 / 38
Location: comp(1750..2823)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion integral inner membrane protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXZ4_PARAV similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 354.0
  • Bit_score: 515
  • Evalue 3.20e-143
  • rbh
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:KIC74129.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 357.0
  • Bit_score: 612
  • Evalue 4.60e-172
sctU, cdsU; type III secretion integral inner membrane protein; K03229 type III secretion protein SctU similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 354.0
  • Bit_score: 515
  • Evalue 1.00e-143
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Neochlamydia sp. EPS4 → Neochlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 1074
ATGGGTGAAAAAACCGAAGAAGCAACCCCAAAAAAGTTAAGGGATGCTAAAAAAAAGGGACAGGTGGCTAAATCTCAAGATCTGCCATCTGCTTTTACTTTTATCGTCTCTGTTTACGCCACAATTGCCTTAAGTGAAATGCTTTATCACCAAATGGGAGATTTTACTGTTAGCACATTTAAAATGATTGCTAATACCAACTTGGATGTGGTGATTCCTCAACTCTATTATCAGTCTGCTATTGTTATTTTTATTGCTAGTATTCCCCTAATGGCCATTGTGACAATTATAGGGGTTTTGGTGACTTTTTTAACAGTTGGCCCGGTTTTTGCATTAGAAGTATTCAAGTTTGACCCCAAAAAATTTGATCCCGTGCAAAACTTGAAATCTAAATTTAAGATGGCCACTTTGGTGGAACTTATAAAATCTACACTAAAATTGATCATTGCGGGTTATATCATTTACCAAGTAATGATGAGCAGTTTACCTGTACTTACACACACTGTGTCCCTTCCTATGCTGTCTGCTCTCATGGTATTTAACGCATTTCTTATGGAAGTTGTATTAAAAGTGGGCCTATTTTTTATGATCATTGCTGTAGCCGATTTTATTTATCAAAAGAAGAATTTTGCTAAAGAAATGCGTATGGAAAAATTCGAAGTTAAGCAAGAATATAAAAACACAGAGGGCGATCCGCAAATTAAAGGTAAAAGAAAACAAATCGCACAAGAGATTGCTTATTCTGATGGTCCGGCTGCGGGAGTAAAAAGAGCTAAGGCGGTAGTTACAAACCCTACTCACCTTGCGATTGCTATAGGCTACGAACGCGAAGTAGACGCCGCTCCTTATGTTTTAGTCATGGGAAAAGATTTAATGGCGGAAAGAATTATTAAACTAGCTGATGAATATGATGTTCCGGTTGTGAGAAATATAAGGCTTGCTCACCGCTTATGGGAATCTGGAGAAATTTATCAATATATACCAGAGGATACCTACGAGGCCTTAGCAGAAATATTACGCTGGGTTAATTCCTTAAACACTGAAACTCAATATGAATACACAGGGGATAAGTAA
PROTEIN sequence
Length: 358
MGEKTEEATPKKLRDAKKKGQVAKSQDLPSAFTFIVSVYATIALSEMLYHQMGDFTVSTFKMIANTNLDVVIPQLYYQSAIVIFIASIPLMAIVTIIGVLVTFLTVGPVFALEVFKFDPKKFDPVQNLKSKFKMATLVELIKSTLKLIIAGYIIYQVMMSSLPVLTHTVSLPMLSALMVFNAFLMEVVLKVGLFFMIIAVADFIYQKKNFAKEMRMEKFEVKQEYKNTEGDPQIKGKRKQIAQEIAYSDGPAAGVKRAKAVVTNPTHLAIAIGYEREVDAAPYVLVMGKDLMAERIIKLADEYDVPVVRNIRLAHRLWESGEIYQYIPEDTYEALAEILRWVNSLNTETQYEYTGDK*