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SCNpilot_expt_500_bf_scaffold_5232_6

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 9 / 55 BSCG 11 / 51 ASCG 7 / 38
Location: 3617..6022

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=2 Tax=Microbacterium RepID=H8E4R5_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 444.0
  • Bit_score: 862
  • Evalue 4.10e-247
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIC07854.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 444.0
  • Bit_score: 862
  • Evalue 5.80e-247
branched-chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 442.0
  • Bit_score: 486
  • Evalue 1.50e-134
  • rbh

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2406
ATGACACCCGCCGAGACCGCACGTGAAGAGCGGCGCGGGGGGATCTACGCCTTCGCGGCGTACTTCCTCTGGGGCTTCATGCCCCTCTACTTCCTGCTGCTGGCGCCCATCGGGCCGTGGGAGATCGTCGTCTGGCGCATTCTCTTCTCCCTCGCGTTCTGCGCGGTCCTGCTCACCGTCACCCGCACGTGGGGCAAGCTCTTCGCGATCCTGCGCGATCGGCGGCTCGTGTTCTGGACGATCGTCGCGGGCCTGCTGATCTACGTGAACTGGCAGGTGTTCCTCATCGGCATCCTGACCGGTCACGTCATCGAGGGCAGCCTCGGCTACTTCATCAACCCGATCGTGACCGTGCTGCTGGGTGTGATCGTGCTGAAGGAGCGCCTCCGGCTGGCACAGTGGATCACGATCGGCTTCGCGGGCCTGGCCGTGGTCGTCATCATCGTGGCCTACGGATCCTTCCCCTGGATCGCACTGACCCTGGCGGCGAGCTTCGGCACCTACGGTCTCGTGAAGAAGCAGATCGGTCCTCGGGTCGATGCCATCAGCGGACTCACTCTCGAATCGCTGTGGCTGACCCCCATCGCCCTGATCCAGCTCGTCGTGGTCGCCGCCACCACCGGCCTCGTCTTCGGCACCCAGGGCGTCGGGCACACCGTGCTGGTCACCCTCGCGGGCGTCGTCACCGCTGTTCCGCTGCTGCTGTTCGCCGCGGGGGCGCGCCGGGCGCCGCTCACCGTGATCGGCCTGCTGCAGTTCGTCGCCCCGATCCTGCAGTTCATCACCGGGGCGTGGATCCTGCACGAGCCGATGCCGCTCGAACGCTGGATCGGGTTCGCGCTCGTGTGGGTCGCGCTGGTCGTGCTGAGCGTCGATTCCGTGGTGTCGTCGCGGCGGTCCCGGAGCATCCGGCGGTGCTCCCGCGCGCACGGCGAGGTTCATAACGATTGCGTCGCGGTGCTTTTCTTCGATGCGTGCGCGAAACATCCTGGTGACACAGCAGGTTTAGCGTTCAAGCCAGACCGCGGAGCCCGTGCGCCGCGCGATGTCATCGAAGAAAGGGAAGAACCCATGGTTCATCGCAACAAGGCGCTCATCGCCGCGTTTGCGCTCGCGGGCGCTGCGTCGCTCGCCCTCGCAGGGTGTTCGAGCTCGGGTGGGGGCGCCGCCACGACGGCTCCCACGGCAACCTCGACGGGGTCGGCGGACCCTGCCGCCGCCTGCAAGCCCGGCACGCCCTCGACCGGACCGTTCACGCTCGCGACGATCCTGCCGCAGACCGGCTCGCTGGCCTACCTCAACCCGCCCGCCGAGGCCGGCTACGGCCTGGCCGTCGAAGACATCGACGCCGCCGGCGGCGTGCTCGGTCAGCCCATCAAGGTCGCCCCGATCACCGACTCCGGCGCCTCGTCCGACCTGTCGGTCTCCACCGCCTCCGCCGCCCAGATCGCCTCCTCCGACGCGCAGGTCGTGCTCGGTGCCGAGTCCTCGAGCGTCAGCCTCAACTTCGTCGACACCATCGTCTCGAAGTGCAAGGTGCAGATCTCACCCGCCAACACCGCGACCGAGCTGTCGGGTTACTCCAGCTACTACTTCCGCACCGCTCCGCCGGACACGGTGCAGGGTTCGGCGCTGGGCAACCTCGTCATCGGTGACGGCGTCCAGAAGGTCGCTTTCATCGTCTTCAACGACGCCTACGGCACCGGCCTGCGCGATGTCGTCGAAGAGACCGTCACCAAGGCGGGAGGCGAAGTCGTCTACGGCGCCAAGGGCAAGGGTCAGGAGTTCGCTCCCGGTCAGAAGACGTTCTCGTCCGAGGTGTCGGCGGCTCTGGCCGCCAAGCCCGACGCGATCGTGATCCTCGCCTTCGACGAGACCAAGCAGATCGTCCCCGAGCTCAAGGCTCAGGGCTTCGACCTGTCGAAGACCTACCTCGTCGACGGCAACACGGCCGATTACAGCAAGGACTTCGAGGCGGGCACGCTCAACGGCGCCCAGGGCACCATTCCCGGCGCCCAGCCCGACCCCGAGTTCAAGCAGCGCCTCGTGGACTTCTACAAGAAGAGCGCGAACGCCGACCTGAAGGACTTCTCCTACGCTCCCGAGTCCTACGACGCCATCGTGCTCGCCGCACTGGCTGCCGAGAAGGGCAAGGGCACCGACGGTCCGACGATCCAGGCGAACCTCGCCGCGGTCTCGGGCACCACCAACGGTGAGAAGTGCTCCGACTACGCCTCGTGCCTCGCGCTCATCAAGAGCGGCAAGGACATCACGTACACGGGCAAGGCGGGCATCGGTCCCTTCAACTCCCAGAACGACCCGTCGAGCGCCTACATCGGCATCTATAAGTTCGACACCAACAACACTCCCGTCTTCCAGAAGTCCATCCAGGGCTCCGTGAACTGA
PROTEIN sequence
Length: 802
MTPAETAREERRGGIYAFAAYFLWGFMPLYFLLLAPIGPWEIVVWRILFSLAFCAVLLTVTRTWGKLFAILRDRRLVFWTIVAGLLIYVNWQVFLIGILTGHVIEGSLGYFINPIVTVLLGVIVLKERLRLAQWITIGFAGLAVVVIIVAYGSFPWIALTLAASFGTYGLVKKQIGPRVDAISGLTLESLWLTPIALIQLVVVAATTGLVFGTQGVGHTVLVTLAGVVTAVPLLLFAAGARRAPLTVIGLLQFVAPILQFITGAWILHEPMPLERWIGFALVWVALVVLSVDSVVSSRRSRSIRRCSRAHGEVHNDCVAVLFFDACAKHPGDTAGLAFKPDRGARAPRDVIEEREEPMVHRNKALIAAFALAGAASLALAGCSSSGGGAATTAPTATSTGSADPAAACKPGTPSTGPFTLATILPQTGSLAYLNPPAEAGYGLAVEDIDAAGGVLGQPIKVAPITDSGASSDLSVSTASAAQIASSDAQVVLGAESSSVSLNFVDTIVSKCKVQISPANTATELSGYSSYYFRTAPPDTVQGSALGNLVIGDGVQKVAFIVFNDAYGTGLRDVVEETVTKAGGEVVYGAKGKGQEFAPGQKTFSSEVSAALAAKPDAIVILAFDETKQIVPELKAQGFDLSKTYLVDGNTADYSKDFEAGTLNGAQGTIPGAQPDPEFKQRLVDFYKKSANADLKDFSYAPESYDAIVLAALAAEKGKGTDGPTIQANLAAVSGTTNGEKCSDYASCLALIKSGKDITYTGKAGIGPFNSQNDPSSAYIGIYKFDTNNTPVFQKSIQGSVN*