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SCNpilot_expt_500_bf_scaffold_11904_4

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 9 / 55 BSCG 11 / 51 ASCG 7 / 38
Location: 2620..3168

Top 3 Functional Annotations

Value Algorithm Source
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 182.0
  • Bit_score: 371
  • Evalue 5.40e-100
idi; isopentenyldiphosphate isomerase; K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 183.0
  • Bit_score: 281
  • Evalue 1.60e-73
Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Microbacterium RepID=H8E887_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 182.0
  • Bit_score: 369
  • Evalue 1.50e-99
  • rbh

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
GTGTCCCCGACAGAATACGTGGTCCTGCTCGACGACAACGGGGATGAGATCGGCACGGCGCCCAAGGCGAGCGTCCACGGCACCGATACCGCACTTCACCTCGCGTTCTCCTGCCACGTGTACAACTCGCGCGGCGAGACGCTGGTCACACGCCGGGCACTCGACAAGAAGACGTGGCCCGGAGTGTGGAGCAACTCCTTCTGTGGACACCCGCGACCGGCAGAACCGGTGATCGACGCGGTGCACCGCCGCGCGGAGCAGGAGCTCGGTGTCGCCCTGCGCGACGTGCAGATCGCCCTGCCGCTCTTCCGCTACCGCGCGGTCGATGCGAGCGGCATCGTCGAGCACGAGATCTGCCCGGTCTACACCGCACTCGTCGACGACGAACCGCGCCTGAACCCGCTCGAGGTCGCCGAGGCCCGTTGGGTCGATCCGTCCGATCTCGCCGTCTCGCTGCGGGCAACCCCCTGGGCTTTCAGCCCGTGGCTGGTGCTCCAGGCCGAGCAGCTCGGCGTCTTCGAAGAATCCAGCGTGCGGAGAGCGTCGTGA
PROTEIN sequence
Length: 183
VSPTEYVVLLDDNGDEIGTAPKASVHGTDTALHLAFSCHVYNSRGETLVTRRALDKKTWPGVWSNSFCGHPRPAEPVIDAVHRRAEQELGVALRDVQIALPLFRYRAVDASGIVEHEICPVYTALVDDEPRLNPLEVAEARWVDPSDLAVSLRATPWAFSPWLVLQAEQLGVFEESSVRRAS*