ggKbase home page

SCNpilot_expt_500_bf_scaffold_11904_5

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 9 / 55 BSCG 11 / 51 ASCG 7 / 38
Location: 3165..4232

Top 3 Functional Annotations

Value Algorithm Source
geranylgeranyl pyrophosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 347.0
  • Bit_score: 359
  • Evalue 1.20e-96
Polyprenyl synthetase n=2 Tax=Microbacterium RepID=H8E888_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 355.0
  • Bit_score: 670
  • Evalue 7.80e-190
  • rbh
Polyprenyl synthetase {ECO:0000313|EMBL:EIC06798.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 355.0
  • Bit_score: 670
  • Evalue 1.10e-189

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
GTGATCACGCTCCTCGATGACGACGCGCGGCAGAGTATCGACGCCGCCATCGGCGGCGCGCTCAAGCGCCTCGAACGCCGGGCCGCGCCCCTCGGCGACGGCGCGCGGGCGCTGGCAGCCGCGACATCCGCGGCCGCCGCGGATGGCAAACGCCTGCGGCCGGCGCTCGTCGTCGCGGCGTACCGCGCGTTCGGCGGGTCGCCCGACGCCGCCGATGCGGCCGTCTGGGACGTCGCCGCCGCCCTCGAACTTCTGCACACCGCCTTCGTCGTGCACGACGACCTCATCGATCGCGATCTGGAGCGGCGCGGCATCCCGAACGTCGCGGGTCGCTTCCGCACTCGCGCGCAAGCCTTCGGAGCGTCGGGCGACCAGGCGGCGACCGTCGGCGACGCCGCGGCCGTGCTCGCCGGCGATCTCCTGCTGTTCGAGGCGAGCCGACTGGTCGCGTGCGCCTCCGTGGATGCTCCGACACGCGTCGCCCTGCTTCAGATCATCGACGACGCGATCCTCGTCTCGGCATCCGGCGAGCTCGCCGACGTCGAGCACGCTGCCCGCGCGGACTATCCCGAAACCGACGCGCTGCTCGGCGCCGCGCACGACAAGACGGCCGCCTACTCGTTCGAAGCACCACTGCTGGCCGGAGCGGTGATGGCCGGTGCGACCGATGCCGCCCGCGCGCAGCTCTCGCTCGCCGCGGCCGACCTCGGGCTCGCCTTCCAACTGGTCGACGACCTCATCGGGACGTTCGGCTCACGTCGTCAGGCCGGCCGCGACCCGGGGGCCGACCTTCGCGAAGCCAAGCGCACTCCTCTCATCGCGCTCGCGCGCGACACCGCTGCTTGGCCGCGGGTCAGCTCGGCTCTCGCCGTCGCGCATACGGGTCCGATCGCCGTGCGGCGCGCACAGCGCGAACTCGAGGCCAGCGGCGCACGCGACGACCTGGTCGCCCTCATTCACGATCGCCTCAGCCGAGCCCGCTCGCGGGCCGCGTCGCCGTCGCTGCCGCCTGCCGCCGTCGCGCTGCTGGCCGAAGTCGCGAACACGATCGAGGGGCGCATCCCGTGA
PROTEIN sequence
Length: 356
VITLLDDDARQSIDAAIGGALKRLERRAAPLGDGARALAAATSAAAADGKRLRPALVVAAYRAFGGSPDAADAAVWDVAAALELLHTAFVVHDDLIDRDLERRGIPNVAGRFRTRAQAFGASGDQAATVGDAAAVLAGDLLLFEASRLVACASVDAPTRVALLQIIDDAILVSASGELADVEHAARADYPETDALLGAAHDKTAAYSFEAPLLAGAVMAGATDAARAQLSLAAADLGLAFQLVDDLIGTFGSRRQAGRDPGADLREAKRTPLIALARDTAAWPRVSSALAVAHTGPIAVRRAQRELEASGARDDLVALIHDRLSRARSRAASPSLPPAAVALLAEVANTIEGRIP*