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SCNpilot_expt_500_bf_scaffold_27679_1

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 9 / 55 BSCG 11 / 51 ASCG 7 / 38
Location: 173..1300

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 383.0
  • Bit_score: 663
  • Evalue 1.40e-187
Transcription termination factor Rho n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E206_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 385.0
  • Bit_score: 634
  • Evalue 5.00e-179
rho; transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 410.0
  • Bit_score: 401
  • Evalue 2.20e-109

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
GTGGAGGTGCCGTCGGATGCCGAGGCTCCCGCCGCCGCCGAGGTCGAGCCCGCCCCCGTGGAGGCTGAGCCCGCCCCCGTGGAGGCTGAGCCCGCTGCGGCGGAGGCGGCGCCGGTCGTTCCCGAGGAGAAGCCAGCGAAGGCTCCCCGCAAGCGTGCGCCGCGCCGCGCGAAGAGCGCCGACGTCGCGCCCGCTGAGGATGCCGCCACGGACGCGGTGACCGAGACCGCTGCCGCCGCGCAGGACCCGGCAGAGTCCGCCGCTTCGACGCCGACGGCGGCCGACGAGACCCCCGCGGCCGAGGCTGCGGCCGAGACTCCTGCCGCCGACGCCGCCGAGACCGCCGCCGACGCCGCCGAGACCGCCGCCACCGGCGACGCGTCGGGTGCCGAAACGACGGACAGCGCCGCGGCAGACGCGGCAGGCGCCGCCGAGGGCGAGACCCCCAGCCGCAGCCGCTCGCGCAGCCGCAGCCGCAGCCGCAACCGCGGTCAGCGCGGCGAGAACGGCCAGAACGCTCAGGGTGCGCAGAACGCCCAGAACAACGCTCCGGCCGCTCCGGCCGCCGAAGAGAGCGCAGACGGCGACGACGAGCAGGCCCAGGGCCGCGGTCGCCAGCGCAACAAGCGTCGGGGCCCGGCGCAGAACGGCGACGAGTTCGAAACCGAGATCGGCGAGGACGACGTCCTCATCCCGATCGCCGGCATCCTCGACGTCCTCGACAACTACGCTTTCGTGCGCACCACCGGCTACCTGCCGGGGGCGAGCGACGTCTACGTGTCGCTCGGCCAGGTCAAGAAGTACAACCTGCGCAAGGGCGACGCCGTCGTCGGCGCCATCAAGCAGCCGCGCGAGGGCGAGCAGTCCAGCCGCCAGAAGTACAACGCGCTGGTCAAGGTCGACGCCATCAACGGGCTGTCGGTCGACGACGCCGCCGAGCGTGTCGAGTTCGGTAAGCTCACCCCGCTCTACCCGCAGGAGCGCCTGCGCCTGGAGACGGCGCCGGAGAAGCTCACGCAGCGCATCATCGACCTCGTCGCGCCCATCGGAAAGGGCCAGCGCGGCCTCATCGTCGCGCCGCCCAAGGCCGGCAAGACGATCGTGCTGCAGCAGATCGCGAACGCGATC
PROTEIN sequence
Length: 376
VEVPSDAEAPAAAEVEPAPVEAEPAPVEAEPAAAEAAPVVPEEKPAKAPRKRAPRRAKSADVAPAEDAATDAVTETAAAAQDPAESAASTPTAADETPAAEAAAETPAADAAETAADAAETAATGDASGAETTDSAAADAAGAAEGETPSRSRSRSRSRSRNRGQRGENGQNAQGAQNAQNNAPAAPAAEESADGDDEQAQGRGRQRNKRRGPAQNGDEFETEIGEDDVLIPIAGILDVLDNYAFVRTTGYLPGASDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDAINGLSVDDAAERVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAI