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SCNpilot_expt_500_bf_scaffold_34116_2

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 9 / 55 BSCG 11 / 51 ASCG 7 / 38
Location: comp(1270..1827)

Top 3 Functional Annotations

Value Algorithm Source
Competence protein ComEA helix-hairpin-helix repeat protein n=2 Tax=Microbacterium RepID=H8E321_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 185.0
  • Bit_score: 341
  • Evalue 7.40e-91
  • rbh
Competence protein ComEA {ECO:0000313|EMBL:EXJ52833.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 351
  • Evalue 5.90e-94
DNA uptake protein; K02237 competence protein ComEA similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 192.0
  • Bit_score: 204
  • Evalue 3.40e-50

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
CGCGCGCGTCGGCGGCGCGTCGGCACCGGTGCGGCCCTGGTGCTGGTGCTGGCCGCCGCGGCGATCGCGGTCGCGGTGGGATTCGTCCGCTCGGTGGCCACCGCCGACACCGGCGTCGCGGTGGCGCCCGTCGAGATCTCGGCCGCAGCGCTCTACGTGCACGTGTCGGGTGCCGTGGAGCGCCCCGGGCTCTACCGCCTCGACGGCGGAGCGCGCGTCGTCGATGTGGTCTCCGCGGCGGGCGGGTTCACGGACACCGCCGATCGCACGGCGGTCAATCTGGCGCGACCTCTCGTAGACGGCGAGCAGGTGCAGGTGCCGGAGGTGGGGGAGGCGTCGTCCACCGGCGCACCCGTCAGCGGTGACGGACGCGTGAACCTCAACACCGCCGACGTCGCCGCCCTCGACACGCTTCCGCGCGTCGGACCCGCGATCGCAGAGCGCATCATCGCGTGGCGCGAGGAGAACGGCCGGTTCACCAGCGTCGACGATCTGCTGTCGGTTCCCGGCATCGGCGAGAAGATGCTCGCCGGCCTCCGCGACCTGGTGACGGTGTGA
PROTEIN sequence
Length: 186
RARRRRVGTGAALVLVLAAAAIAVAVGFVRSVATADTGVAVAPVEISAAALYVHVSGAVERPGLYRLDGGARVVDVVSAAGGFTDTADRTAVNLARPLVDGEQVQVPEVGEASSTGAPVSGDGRVNLNTADVAALDTLPRVGPAIAERIIAWREENGRFTSVDDLLSVPGIGEKMLAGLRDLVTV*