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SCNpilot_expt_500_bf_scaffold_11107_7

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(2989..3675)

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system coupling protein TraD n=1 Tax=uncultured bacterium RepID=K2FDQ0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 194.0
  • Bit_score: 240
  • Evalue 1.30e-60
Type IV conjugative transfer system coupling protein TraD {ECO:0000313|EMBL:EKE08840.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 194.0
  • Bit_score: 240
  • Evalue 1.80e-60
conjugative transfer protein TraD similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 187.0
  • Bit_score: 207
  • Evalue 6.40e-51

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 687
GGTTTTTCCATCAGGCGTTGGATTCAAGAAGAAGAGCAGAACAATTGGCTTTTTATTACCGCAAGGCCAGATCAGCGAGAAACCTTAAAGCCCTTGATCTCTTGCTGGCTTGAGATTGCTTTTAATGCCGTTATGACTTTAAAACCTAATCAAAAAAGAAGGTTATGGTTCATGATTGATGAGCTCCCTGCCCTTCAACAGTTGCCTTCCTTACCCTTAGCTCTTGCAGAACTGAGGAAATATGGTGGGTGTATCATGGCGGGAATTCAAGGAATGCCTCAGATCAGTGACCTTTATGGGAATGCAGGGTCTCAAGCGATATTAGACCTTTTTAATACCTTTATATTTTTCAGAAGCACTGATCCCCAAACAACGGGATGGATCTCTAAAGTCTTAGGTGAAAAGGATGAGACAGAAATGGTTGAAAATCTCTCATACGGAGCTAATACTATCAGGGATGGCGTGTCATTAAACCAGCAAACTCACACCAAGCCTATTGTGATTCCCACAGAAATCCAGAGCCTTAAAGATCTTGAGGCTTATATCAAACTTCCAGGGANNNNNNNNNNNNNNNNGGATTATAAAAACTTACTTCAAAGAATAAATGCGTTTGATATTAGTCCATTCCCAAGAAATGCCGCTAGGAAAGCTTTTTCATACTCTCAAAAAGAAGTTAATATATTTTAG
PROTEIN sequence
Length: 229
GFSIRRWIQEEEQNNWLFITARPDQRETLKPLISCWLEIAFNAVMTLKPNQKRRLWFMIDELPALQQLPSLPLALAELRKYGGCIMAGIQGMPQISDLYGNAGSQAILDLFNTFIFFRSTDPQTTGWISKVLGEKDETEMVENLSYGANTIRDGVSLNQQTHTKPIVIPTEIQSLKDLEAYIKLPGXXXXXXDYKNLLQRINAFDISPFPRNAARKAFSYSQKEVNIF*