ggKbase home page

SCNpilot_expt_500_bf_scaffold_12996_6

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(3939..4388)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDF4_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 141.0
  • Bit_score: 204
  • Evalue 6.60e-50
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 136.0
  • Bit_score: 261
  • Evalue 8.40e-67
dnaK suppressor protein; K06204 DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 141.0
  • Bit_score: 204
  • Evalue 2.10e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGACAATAACTGGGTTAAGCGAAAAAACTGGCAAACATATTATTTTGTCTCCAGGATATAAACCTACAGAATCTGAAGTATATATGTGTCAGGAACATCTAGAATATTTTAGACAAAAGCTTCTTGGGTGGAAAAATGAGCTTCTTCGCGACTCAGTAGAAACAATTCAACATCTTCAAGAAGAAACTCATCCTGAACCGGATGTGGCTGATAGGGCATCGGCAGAAACTGATCGTGCAATTGAACTTAGAACAAGAGATAGAGAGCGAAAATTAATAAATAAAATTGATGAAGCTTTAATGCGTATTGATGATGGCAGTTATGGATTTTGTGAAGAAACAGGTGACCCTATAGGTCTTCAAAGACTTGAAGCAAGACCTATTGCCACTTTGAGCTTAGAAGCTCTAGAACGCCATGAAAGAGAAGAAAAAGTTTATCGTGACGACTAG
PROTEIN sequence
Length: 150
MTITGLSEKTGKHIILSPGYKPTESEVYMCQEHLEYFRQKLLGWKNELLRDSVETIQHLQEETHPEPDVADRASAETDRAIELRTRDRERKLINKIDEALMRIDDGSYGFCEETGDPIGLQRLEARPIATLSLEALERHEREEKVYRDD*