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SCNpilot_expt_500_bf_scaffold_13772_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(1508..2548)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYN4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 309.0
  • Bit_score: 438
  • Evalue 6.30e-120
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 309.0
  • Bit_score: 438
  • Evalue 8.90e-120
rpsA; 30S ribosomal subunit protein S1 similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 310.0
  • Bit_score: 436
  • Evalue 5.80e-120

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Taxonomy

Nitrospirillum amazonense → Nitrospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ACACACCGTATCTCACTCGGCATGAAACAACTTGAAAATGATCCTTGGCAAAGTATAGAAGCTAAGTTCCCGCTACATACAAAATTATCTGGAACAGTTACAAATATTGCTGATTATGGTGCTTTCGTAGAACTTGATCCGGGTATTGAAGGGCTTGTCCACGTTTCAGAAATGAGCTGGATAAAGAAAAATGTTCATCCTTCAAAACTTTTATCTGTGGGACAAAACGTAGAGGTGATGGTTCTTGAGGTTGATCCTAGCAAACGCCGAATTGCTCTTGGTATCAAGCAATGCCAAGACAATCCATGGGCAACTGTTGCAGAAAAATATCCTGTAGGTTCTGAATTTGAAGGCGAAATTCGCAATATTACTGAATTTGGTCTTTTTGTTGCTGTTTCAGGAGATCTAGATGGTATGGTTCACATGTCTGATCTTTCATGGTCAGAACCATCAGATGAAGCTATTAAAAATTATAAAAAAGGCGAAAAAATCAAGGTTAAAGTTCTTGAAGTTGATCCTGATAAAGAACGTATCTCATTGGGTGTAAAGCAACTTGCAGCAGATCCATTTGCTGAAGGTTTATCCGCTTTGAAACTAAATGATATCGTTACATGCGAAATCACCTCAATTCAAGAAGCCGGTATTGAAGTTAAGGTTACCGAAGGAATAGATGGTTTTATTCGTAAAACTGACTTATCTAAAGAAAGGACTGAACAACGCACTGACCGTTTTGCAGTCGGTGAAAAAGTTGATGCAAAGATTATTAATATTGATCGCTCTGCACGACGCGTTAGTCTTTCAATCAAAGGTCGTGAAATTGCTGAAGAAAAAGAAGCTATGGCAACCTATGGTTCAGCAGACAGTGGCGCAAGCTTAGGTGATATTCTTGGTGCAGCCTTTGATAAAGTAAAAGAAAAAACCAACGAAGAAAAACCAGAAGAAAAGAAAACCACTAAAGCAGCAGCAAAACCAAAAGAAGAAAAACCTGCTAAAACTTCAAAGAAAAAAGCATCTGAACCAAACACTGATGGTGATGCATAA
PROTEIN sequence
Length: 347
THRISLGMKQLENDPWQSIEAKFPLHTKLSGTVTNIADYGAFVELDPGIEGLVHVSEMSWIKKNVHPSKLLSVGQNVEVMVLEVDPSKRRIALGIKQCQDNPWATVAEKYPVGSEFEGEIRNITEFGLFVAVSGDLDGMVHMSDLSWSEPSDEAIKNYKKGEKIKVKVLEVDPDKERISLGVKQLAADPFAEGLSALKLNDIVTCEITSIQEAGIEVKVTEGIDGFIRKTDLSKERTEQRTDRFAVGEKVDAKIINIDRSARRVSLSIKGREIAEEKEAMATYGSADSGASLGDILGAAFDKVKEKTNEEKPEEKKTTKAAAKPKEEKPAKTSKKKASEPNTDGDA*