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SCNpilot_expt_500_bf_scaffold_15364_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 1..885

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 296.0
  • Bit_score: 349
  • Evalue 7.90e-94
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHI5_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 296.0
  • Bit_score: 349
  • Evalue 2.50e-93
Isocitrate dehydrogenase {ECO:0000313|EMBL:AIL12542.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 294.0
  • Bit_score: 481
  • Evalue 1.00e-132

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
CTAAAGCAAACTTTTGAAGATATTTCTAAAGAATATCCAACCATAGAAGCTCACCACATTATTGTTGATAATTGTGCCCATCAATTAGTTAAAACACCTGAATCATTTGATGTCATCGTTACAACAAATATGAATGGCGATATTTTAAGTGATTTAGGTTCAGGCTTAATTGGCGGGCTGGGATTTGCGCCAGGCGCGAATCTAGGAAATGATGTTGCTATTTTTGAGGCTGTTCATGGTTCAGCACCTAAGTATGCAGGACAAAATACAATTAATCCTACGGCCGTTATTCTTTCCAGTTTAATGATGTTAAGATATCTAGGTGAGTTTGAGGCGGCTAATACAATTGAACAAGCTATCTTAGTCACGCTTCAAGAAGGACAAGCTTTAACAAGAGATGTTATAGGAAAACAAGATGCTGCTTCAACAACAGCGTATTGTGAAGAAATTATTAAGAACTTAGGGAAAAAATCTACATTCTGGAAAGCCAGAAATTATACTCCCCTTAAAATGCCAGTAATTTCTCGGGCACCAGAAATTGTTAAGGCTAGCTCTAAAGTTGTCGGCATTGACCTTTTTATTCAATCTAATTCGAACGCAGAAGATCTTGGAAAAAGCTTAGAAGAAATCGTCTCAGGCTTACCCATTATGCTTAAAATGATTTCTAATCGTGGGGTAAAAGTATATCCAAGCACGGGAACATCATTAGATGTTGTTGATCTCTGGAGCTGCCGTTTCATGTCGGAAAAGCAAGTTGATATGACTGATCAATTAATTTGTCGTTTGCTTGAAAAAGTAAGTCTTTCTTATACCTGGATGCATTTAGAAAAACTTACAATTTTCGGAGAACGTATAGGCTTTACAAAAGCCCAAGGCGAAGATTAG
PROTEIN sequence
Length: 295
LKQTFEDISKEYPTIEAHHIIVDNCAHQLVKTPESFDVIVTTNMNGDILSDLGSGLIGGLGFAPGANLGNDVAIFEAVHGSAPKYAGQNTINPTAVILSSLMMLRYLGEFEAANTIEQAILVTLQEGQALTRDVIGKQDAASTTAYCEEIIKNLGKKSTFWKARNYTPLKMPVISRAPEIVKASSKVVGIDLFIQSNSNAEDLGKSLEEIVSGLPIMLKMISNRGVKVYPSTGTSLDVVDLWSCRFMSEKQVDMTDQLICRLLEKVSLSYTWMHLEKLTIFGERIGFTKAQGED*