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SCNpilot_expt_500_bf_scaffold_20055_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 53..310

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraD id=4537104 bin=GWC2_Alphaproteobacteria_42_16 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 81.0
  • Bit_score: 65
  • Evalue 2.80e-08
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 81.0
  • Bit_score: 65
  • Evalue 3.90e-08

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGCAAATAAGACAGTTAGGAATTAAGCTAACGGGAAATATGAGGTTTGTAAGGAGCTCAATTAGCGCCGTCTCATTGAACTCGGAGGCTTCGTCTCAAACAGCTCAACTCCAAGATTGGGATTCAAATACACTTTTTGGAGCCCTTCTCTCCATCAAAGAAAAAGAACGTGATCAACTTCAGATTGAAGATTGGAAATATAAAGGAGGAGTTGAATTTTCTTCAGAAAAAGAATCTAAAAGAGGTTATCTGTCGTAA
PROTEIN sequence
Length: 86
MQIRQLGIKLTGNMRFVRSSISAVSLNSEASSQTAQLQDWDSNTLFGALLSIKEKERDQLQIEDWKYKGGVEFSSEKESKRGYLS*