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SCNpilot_expt_500_bf_scaffold_20682_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(1..1146)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug efflux transporter id=4908529 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 382.0
  • Bit_score: 454
  • Evalue 1.20e-124
multidrug efflux transporter similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 382.0
  • Bit_score: 420
  • Evalue 6.20e-115
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 382.0
  • Bit_score: 454
  • Evalue 1.70e-124

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGAACTTAACAGACATATGTATTCGTCGCCCTGTATTATCTACTGTGATGAGCCTTGTTATTATTCTTTTAGGAATTGTAACTTGGACACGTCTTCAAGTACGTCAATATCCCAACGTAGATGAACCAAAAATTAGTATTATTACGCAGTTTGAAGGGGCAAGTCCTGAAATTATCGAAGCTCAAGTTACAAAACCTTTAGAGGATGCGTTATCAGGTATTGAAGGACTATATCTTATGACTTCAAGCAGTGAAGTTGAAGAAAGTCGAATTACGCTTGTTTTTGAATTGAACCGTCCTATTGAAGCTGCAGCAAACGATGTTCGTGATCGAATCAGCCGTATTCGCAATAAACTTCCTAATGATGTGAGTGACCCACGCATTAAAAAAGCTGACGCCGACGCTTTTCCTTTTATGTATCTTGCCGTTTTTAGCGATAGACACGATACCAAAGATATTGCCGACTATGCGCGTCGCTTTTTAGAAAGCCAACTTGAAGTGATTAATGGTGTATCAAGCGTTGAAATCTTTGGCGGTGGTGAGTATGAAATGCATATTTACCTTGATCCTGTCAAGATGGCCTCGTATCAGGTAACTGCAGAAGATGTAGCTCAAGCTTTGAAAAAGCAGAACATTGAGAAACCTGCTGGACGTATTATTACAAAAGATCGTGAGATCACTGTTACGACAAAAGCTGCTCTTTCCACTGAGAAAGATTTTAATAACTTAATTATCTTTGAACGTGATGGTTATCTTGTTCGTTTATCAGATGTTGGTGAAGCAAAATTAGATGCCATCGATACGCGTAGTCGCGTAAGATTTAATGATAAAAATGCTGTTGCTATTGGTTTAATAAAACAATCTATTGCCAACCCTCTTGATATTGCTCGTGCTGTAAAAAAGCAACTTCCTCGCTTAAGAGAAGGTCTTCCAAGAGGTATGAAAATGGAAATTGCTAATGACAAAACTGTCTATATCGAGCGTTCTATCGAAGAAGTTTATCATACTCTATTTGAAGCAACAGTACTTGTAATCTTGGTTATTTTAGCATTTTTACGCTCATTCAGAGCTGTAATTGTTCCAATTGTGACGATCCCTGTTTCTCTTATTGGCGCATTTGCTTTAATGTATGCACTTGGCTTTACA
PROTEIN sequence
Length: 382
MNLTDICIRRPVLSTVMSLVIILLGIVTWTRLQVRQYPNVDEPKISIITQFEGASPEIIEAQVTKPLEDALSGIEGLYLMTSSSEVEESRITLVFELNRPIEAAANDVRDRISRIRNKLPNDVSDPRIKKADADAFPFMYLAVFSDRHDTKDIADYARRFLESQLEVINGVSSVEIFGGGEYEMHIYLDPVKMASYQVTAEDVAQALKKQNIEKPAGRIITKDREITVTTKAALSTEKDFNNLIIFERDGYLVRLSDVGEAKLDAIDTRSRVRFNDKNAVAIGLIKQSIANPLDIARAVKKQLPRLREGLPRGMKMEIANDKTVYIERSIEEVYHTLFEATVLVILVILAFLRSFRAVIVPIVTIPVSLIGAFALMYALGFT