ggKbase home page

SCNpilot_expt_500_bf_scaffold_20682_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(1190..1708)

Top 3 Functional Annotations

Value Algorithm Source
efflux transporter RND family, MFP subunit n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1B5 similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 184.0
  • Bit_score: 127
  • Evalue 1.20e-26
Uncharacterized protein {ECO:0000313|EMBL:AIL13086.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 169.0
  • Bit_score: 311
  • Evalue 6.20e-82
putative RND efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 144.0
  • Bit_score: 127
  • Evalue 4.90e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
AGAGTCCCAGCTGAATATTTAAGATATATTAGCGTTGGTCAAACTTTAACGATCGTTATTGATGGTTTTGAAGACGAACCCTTTTCGGGAACAGTTGAGGCCATCGATGCAAAAGTTGACCCACATGCTCATAGTATTTCTGTACGTGCAAATTTACGCAATGAAAAGAGAACTTTGAAACCTGGTCTTTTTGCACGTGTTGACCTCGTCGTTGGTTCAAAAGATAACGCACTTGTTGTTCCTTTAAGTGCTGTTGAAAGTAGTGGCGATGAAGAATTTGTTTATAAAGTTTTTAATGGCGTTGCCTATCGTTTTCCAGTAACAACAGGAATCCAGGAAGGTGATAACATTGAAATTGTCCGTGGTTTACAAGAAAGAGATGTTGTTGTAACAGTAGGTCAAAACAAAATTCGTGACGGCATTCCTGTCGTTTATGAAGGAATGGAAAAAGATTTAAAGAAGGAAGAAGATTCGAAAGAATCAAACAATTCTAACAATAATAAAAAAACCTCAAGGTAA
PROTEIN sequence
Length: 173
RVPAEYLRYISVGQTLTIVIDGFEDEPFSGTVEAIDAKVDPHAHSISVRANLRNEKRTLKPGLFARVDLVVGSKDNALVVPLSAVESSGDEEFVYKVFNGVAYRFPVTTGIQEGDNIEIVRGLQERDVVVTVGQNKIRDGIPVVYEGMEKDLKKEEDSKESNNSNNNKKTSR*