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SCNpilot_expt_500_bf_scaffold_27476_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(296..1309)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 337.0
  • Bit_score: 632
  • Evalue 3.10e-178
Membrane protein insertase YidC id=3443559 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 332.0
  • Bit_score: 440
  • Evalue 2.10e-120
Protein translocase subunit yidC; K03217 preprotein translocase subunit YidC similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 335.0
  • Bit_score: 423
  • Evalue 4.90e-116

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
GATTTACAAAAAGGAGACCAGAGTCAAATAAGCCAAGGAGGGTGGCTTGGGGTAACGGACAAGTATTGGCTAACGGCTTTTATTCCTGATCAGACGCAAGAGGTTAAAGCAAGTTTTCGCCAGGTCGGATCTCCTTCCCAAGAACGCTTCCAAGTTGATTATTTGATGACAACACCCGTTCTACAAGCTGGAGGTGTTCAAGAAACCAAGAGTTCTTTCTTTGCGGGGGCTAAAATCTTAAACCTTTTAGATAGTTATGAAGCTAAATTAAATGTTAAACATTTTGACTTAGCAGTTGATTTCGGATGGTTTTACTTCTTAACAAAACCCATTTTCCATATTCTAACGCTTGCGCATGAATGGCTAGGAAATTTTGGCCTTGCAATTATGTTGTTAACTGTTTTGCTAAAATTATTGATGTTTCCTTTAGCCAATAAGTCGTATCGATCAATGGCACAAATGAAGCGGTTAACGCCTCAAATTACGCGCCTTCGCGAAAGATATGGCGAAGATAAGCTGCGCATGAATCAGGAAATGATGGCACTTTATAAGAAAGAAAAAATAAATCCTATGGCAGGATGCTTACCGATGGTTGTGCAAATTCCTGTTTTCTTTGCACTTTATAAAGTTCTTTTTGTGAGCATAGAAATGCGACAGGCGCCTTTTTATGGTTGGATTCATGATCTTTCTGCGCCCGATCCTACAAGCCTTTTTAATCTCTTTGGCTTGCTTCCATGGACGCCCCCAACTTATTTAATGATTGGTATTTGGCCATTATTGATGGGGCTTTCTATGTTTGTTCAACAGAAGTTAAATCCCCCACCTTCAGATCCTGCGCAAGCAAAGATTTTTATGATTATGCCTGTGATGTTTACAGTTATGTTTGCTCAATTCCCTGCAGGCTTAGTCATTTATTGGACATGGAGCAATTTATTAACAATTTTGCAACAATGGGCCATGATGTCTTTGCACAACAAAGATCAACAGAAGAAAGCGATCGTAAAGAAAAAATGA
PROTEIN sequence
Length: 338
DLQKGDQSQISQGGWLGVTDKYWLTAFIPDQTQEVKASFRQVGSPSQERFQVDYLMTTPVLQAGGVQETKSSFFAGAKILNLLDSYEAKLNVKHFDLAVDFGWFYFLTKPIFHILTLAHEWLGNFGLAIMLLTVLLKLLMFPLANKSYRSMAQMKRLTPQITRLRERYGEDKLRMNQEMMALYKKEKINPMAGCLPMVVQIPVFFALYKVLFVSIEMRQAPFYGWIHDLSAPDPTSLFNLFGLLPWTPPTYLMIGIWPLLMGLSMFVQQKLNPPPSDPAQAKIFMIMPVMFTVMFAQFPAGLVIYWTWSNLLTILQQWAMMSLHNKDQQKKAIVKKK*