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SCNpilot_expt_500_bf_scaffold_30117_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(2..601)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 200.0
  • Bit_score: 377
  • Evalue 1.40e-101
Tryptophan--tRNA ligase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGD6_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 199.0
  • Bit_score: 300
  • Evalue 1.20e-78
trpS; tryptophanyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 199.0
  • Bit_score: 300
  • Evalue 3.70e-79

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GTGAAGCGTATTTTTTCAGGGATTCAACCTTCTGGAAATCTAACTCTCGGGAATTATCTCGGTGCTATTAAAAATTGGATACCTCTACAAAGTCAAGGTGAGGCGCTTTTTTGTATTGTTGATCTTCATGCCATTACAATCCCTCAAGACCCTGCCTCATTAAAATCACGTACACTAGAGGTCGCAGCCACTTATCTTGCGTCTGGTATAGATCCGCAAAACGCTATAATTTTTGTTCAAAGTCAAGTTCCACAACATGCTGAGCTAGCTTGGATTTTAAGTTGTCTAACACCTTTAGGGTGGCTTAACCGGATGACACAATTTAAAGATAAAGCTGGGAAACAACGTGAGCAGGCAGCTTTAGGGCTTTATTCTTATCCCGTGTTGCAAGCCGCTGATATTTTACTTTATCAAACAACGCATGTGCCTGTAGGGGAAGATCAAAAGCAACATCTTGAACTCGCACGCGACATTGCAGGAGCGTTTAATCGAGCCTATAACCAAGATTTTTTTACGCTGCCTGAACCTCAAATATTGGGGATAGCGCCGCGTGTTATGAGTTTAAGAGACGGAACAAAAAAGATGAGCAAATCTGATCCT
PROTEIN sequence
Length: 200
VKRIFSGIQPSGNLTLGNYLGAIKNWIPLQSQGEALFCIVDLHAITIPQDPASLKSRTLEVAATYLASGIDPQNAIIFVQSQVPQHAELAWILSCLTPLGWLNRMTQFKDKAGKQREQAALGLYSYPVLQAADILLYQTTHVPVGEDQKQHLELARDIAGAFNRAYNQDFFTLPEPQILGIAPRVMSLRDGTKKMSKSDP