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SCNpilot_expt_500_bf_scaffold_34730_3

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(647..781)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L34 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RL34_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 44.0
  • Bit_score: 81
  • Evalue 3.30e-13
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 44.0
  • Bit_score: 84
  • Evalue 3.20e-14
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 44.0
  • Bit_score: 81
  • Evalue 1.00e-13

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 135
ATGAAGCGTACCTATCAACCAAGTGTTTTGGTCAGGAAACGTCGTCATGGGTTTCGGGCGCGTATGGCAACACTTGGTGGCCGTAAAGTTTTAGCAAGTAGACGATCCAAAGGGCGCGCAAGACTCTCTGCTTAA
PROTEIN sequence
Length: 45
MKRTYQPSVLVRKRRHGFRARMATLGGRKVLASRRSKGRARLSA*