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SCNpilot_expt_500_bf_scaffold_12133_3

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: 2525..2851

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor n=1 Tax=unidentified eubacterium SCB49 RepID=A6EN70_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 106.0
  • Bit_score: 143
  • Evalue 1.70e-31
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KFC24211.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 109.0
  • Bit_score: 215
  • Evalue 3.80e-53
RNA polymerase ECF-type sigma factor, sigma70 superfamily similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 106.0
  • Bit_score: 138
  • Evalue 1.30e-30

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Taxonomy

Epilithonimonas sp. FH1 → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 327
ATGCAGATTTTAAACTTCGAAGACATTTATCACGATTACTGGAAACGGATTTTTCGGCTTTGTATGGGTTATGTGAATGATGATGAATTGGCAAAAGATCTCTGTCAGGAAACATTTGTCGCTGTGTTTCAGCAATTGCCAAAATTCCGTCAGGAAGCAGCGGTCGGAACCTGGATCTACAGAATTGCGACGAATATCTGTCTAAGGCAAATCAATCTGGAAAAACGAATGCCCAAAAGCGAATTGCCTTATCAAATCAAGGATAATTATGAGAAAGACAACAAGCTGGAAAAAGATAAAATGACGGATTTTCTTTACCAATGCATC
PROTEIN sequence
Length: 109
MQILNFEDIYHDYWKRIFRLCMGYVNDDELAKDLCQETFVAVFQQLPKFRQEAAVGTWIYRIATNICLRQINLEKRMPKSELPYQIKDNYEKDNKLEKDKMTDFLYQCI