ggKbase home page

SCNpilot_expt_500_bf_scaffold_25476_3

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: 1345..2217

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor NusA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVV0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 291.0
  • Bit_score: 535
  • Evalue 3.20e-149
  • rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 291.0
  • Bit_score: 540
  • Evalue 1.40e-150
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 291.0
  • Bit_score: 528
  • Evalue 1.60e-147
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGGATAATTTAGCTTTAATAGAAGCCTTTGGTGATTTTAAAGAAATAAAAAATATCAGCAAAATAGATTTAATGGCTATTATCGAAGATTCTCTTAAGACTCTTCTTAGAAAACGATATGATTCTGATGACCATTTTGATGTGATTGTGAATCCTGATAAAGGAGATTTTCAGATCTTTTTGAACAAAGTGATTGTTGAGGATGAGATGTCTGAGGATGATGACCTGGAAATCGAGATTTCTGAAGTTAGAAAAATTGACCCGACTTTTGAAGTAGGTGAAGAATATACGCAAGAGATTCCTGTTTCCAAATTAGGAAGAAGAAATATCTTAACACTTAAGCAGATCTTGGCTACAAAAATCCAAGAGCATTTTAATGCTGCTTTATATGATCAGTTCCGTGACAAGATTGGAGAATTGGTAGTTGGAGAGGTTCACCATATCCGTCACAAGCACGTGATTTTGTTGGATGATGAAGGGAATGAATTCATTCTTCCAAAAGAAAATCAAATCCCTTCTGATTTTTTCAAAAAAGGTGATAATGTAAGAGCGATTGTGGAAAGTGTGGATTTCAGAGGATCAAAACCTCAGATTATGGTTTCCAGAACAGCGCCTAAATTCCTTGAAGAATTATTAGAGCTTGAGATTCCGGAGATCCAGGATGGAACAATTATCTTGAAAAAAGTAGTTAGAATCCCAGGTGAAAAAGCGAAGATTGCCGTAGATGCTTATGATGATAGAATTGATCCGGTTGGAGCTTGTGTTGGTGTGAAAGGTTCAAGAATCCACGGGGTTGTAAGAGAATTAAGAAACGAAAATATCGATGTGATCCAATGGTCTAAGAATCCTGAGATTCTTGTGAAAAGAGCTTTA
PROTEIN sequence
Length: 291
MDNLALIEAFGDFKEIKNISKIDLMAIIEDSLKTLLRKRYDSDDHFDVIVNPDKGDFQIFLNKVIVEDEMSEDDDLEIEISEVRKIDPTFEVGEEYTQEIPVSKLGRRNILTLKQILATKIQEHFNAALYDQFRDKIGELVVGEVHHIRHKHVILLDDEGNEFILPKENQIPSDFFKKGDNVRAIVESVDFRGSKPQIMVSRTAPKFLEELLELEIPEIQDGTIILKKVVRIPGEKAKIAVDAYDDRIDPVGACVGVKGSRIHGVVRELRNENIDVIQWSKNPEILVKRAL