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SCNpilot_expt_500_bf_scaffold_25997_1

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: 2..529

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBJ7_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 169.0
  • Bit_score: 280
  • Evalue 1.10e-72
AraC family transcriptional regulator {ECO:0000313|EMBL:KFC23037.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 173.0
  • Bit_score: 320
  • Evalue 1.40e-84
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 169.0
  • Bit_score: 280
  • Evalue 3.50e-73

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Taxonomy

Epilithonimonas sp. FH1 → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 528
GATAAACACTCAAAATCAAAAATTCCAACAGAGAAAATCATCAGTTTCGAGAAACATCCTTTATTGGAAAGCTGTTTGAATTCGTTGATCCCGTATTTTGAGATGCAAAATAATTTCCCGGAAAATATTGCCTCACTGAAAATTAACGAGGCGATTAATATTCTCAGAACAATTGACGAAAATATTGATGCTGTTCTTAATAATTTTGATGAACCGGGAAAAATTGATCTGGTAACTTTTATGGAAAAGAATTTTATGTTCAATATGCCGCTGGAGAAATTCGGATATCTCACGGGTCGCAGTTTGACAACTTTCAAACGTGATTTTTATAAGGCCTTCAATTCCACACCGCAAAGGTGGCTGACAAAAAAACGTTTGGAATTAGCTCATTATGAAATTGCAGAGAAACATAAAAAACCGGTAGATGTTTATTTCGAAACAGGGTTTGAAAATCTGTCCCATTTTTCTTTTGCTTTCAAGAAACAGTTTGGATATGCTCCAACGAGGCTTGTGTCAAATATTCAATAA
PROTEIN sequence
Length: 176
DKHSKSKIPTEKIISFEKHPLLESCLNSLIPYFEMQNNFPENIASLKINEAINILRTIDENIDAVLNNFDEPGKIDLVTFMEKNFMFNMPLEKFGYLTGRSLTTFKRDFYKAFNSTPQRWLTKKRLELAHYEIAEKHKKPVDVYFETGFENLSHFSFAFKKQFGYAPTRLVSNIQ*