ggKbase home page

SCNpilot_expt_500_bf_scaffold_23552_1

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 13 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: 3..1514

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 504.0
  • Bit_score: 985
  • Evalue 2.80e-284
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 504.0
  • Bit_score: 978
  • Evalue 7.80e-283
DNA-directed RNA polymerase subunit beta' n=2 Tax=Bergeyella zoohelcum RepID=K1LTJ0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 504.0
  • Bit_score: 985
  • Evalue 2.00e-284

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bergeyella zoohelcum → Bergeyella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1512
TCACCAGAATCCATCCTTCAGGAGTCAAGAGGAGAGGTGCTGAAGCCCGAAACCATCAACTACAGAACGCACAAACCCGAAAGAGACGGTTTGTTCTGTGAAAAAATATTCGGTCCTGTAAAGGATTACGAATGTGCCTGCGGAAAATACAAACGTATCCGTTATAAAGGTATCGTTTGCGACCGTTGTGGTGTAGAAGTTACCGAGAAAAAAGTACGTCGTGAGCGTATTGGTCACATTAATCTTGTGGTTCCTATTGCTCACATCTGGTATTTCCGTTCGTTGCCGAATAAAATTGGTTACTTGTTAGGATTGCCTTCCAAGAAATTGGATATGATTATCTACTATGAAAGATATGTAGTTATTCAGCCAGGTATCGCTAAAAAGGCAGATGGTTCCGATTTCGATGATATGGAATTTTTAACAGAAGAAGAGTATCTTGATATTTTGGATACGCTTCCTGTAGAAAACCAATATCTTGACGATTCGGATCCCAATAAATTTGTGGCAAAAATGGGTGCAGAGGCCGTTGAAGGATTGCTGAAAAGAATCGATCTGGATGCATTGTCTTTCGACCTTCGTCACAAAGCACACAACGAATCATCAAAGCAAAGAAGAACAGAAGCGCTGAAAAGACTGAACGTGGTAGAAGCACTTCGTGGTGCCAACACCAGAATGATCAATAAACCAGAATGGATGATCATGCGTGTACTTCCAGTTATTCCACCAGAATTAAGACCATTGGTTCCGTTGGATGGAGGACGTTTTGCAACCTCAGACTTGAATGATCTTTACCGTCGTGTGATCATCAGAAATAACCGTTTGAAAAGATTACTGGAAATTAAAGCTCCAGAAGTGATCTTGAGAAACGAAAAACGTATGCTTCAAGAATCTGTAGATTCGTTGTTCGATAACACCAGAAAATCTTCTGCTGTAAAATCGGAATCCAACAGACCATTGAAATCACTTTCTGATTCTTTGAAAGGTAAACAAGGTCGTTTCCGTCAGAACTTATTAGGTAAGCGTGTTGACTATTCAGCTCGTTCGGTAATTGTTGTTGGTCCAAACCTACAACTTCACGAATGTGGTATTCCTAAAGATATGGCAGCCGAATTGTACAAACCATTCATCATCAGAAAATTGATTGAGAGAGGAATTGTAAAAACGGTAAAATCAGCAAAAAGAATCATCGATAGAAAAGAACCTGTCGTTTATGATATCCTTGAAAACGTGATGAAAGGTCACCCAGTTCTTCTGAACCGTGCGCCTACGCTTCACCGTTTGGGTATCCAGGCATTCCAGCCGAAGATGATTGAAGGCAAAGCCATCCAACTTCACCCATTGGTAACAACGGCATTCAACGCCGATTTCGATGGTGACCAGATGGCGGTGCACTTACCTTTGGGCCCAGAAGCTATTTTGGAAGCTCAGTTATTGATGTTAGGTTCTCAAAATATCCTTAACCCAGCGAATGGTTCTCCAATTACCGTACCTTCTCAGGACATGGTATTG
PROTEIN sequence
Length: 504
SPESILQESRGEVLKPETINYRTHKPERDGLFCEKIFGPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERIGHINLVVPIAHIWYFRSLPNKIGYLLGLPSKKLDMIIYYERYVVIQPGIAKKADGSDFDDMEFLTEEEYLDILDTLPVENQYLDDSDPNKFVAKMGAEAVEGLLKRIDLDALSFDLRHKAHNESSKQRRTEALKRLNVVEALRGANTRMINKPEWMIMRVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLLEIKAPEVILRNEKRMLQESVDSLFDNTRKSSAVKSESNRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPNLQLHECGIPKDMAAELYKPFIIRKLIERGIVKTVKSAKRIIDRKEPVVYDILENVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLVTTAFNADFDGDQMAVHLPLGPEAILEAQLLMLGSQNILNPANGSPITVPSQDMVL