ggKbase home page

SCNpilot_expt_500_bf_scaffold_23787_2

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 13 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(721..1500)

Top 3 Functional Annotations

Value Algorithm Source
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 259.0
  • Bit_score: 430
  • Evalue 1.40e-117
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 259.0
  • Bit_score: 395
  • Evalue 1.10e-107
Valine--tRNA ligase n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MQJ4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 259.0
  • Bit_score: 401
  • Evalue 8.40e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium antarcticum → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 780
ATTGACTGGTTCGGTAACCAAATGGATAAAACCATTCTGGAGATTGAAGAGCAATTCGAAAAATTCAGAATTTCGGATGCTCTGCATTTGGTCTATAAACTGATTTGGGACGATTTCTGTTCCTGGTATCTGGAAGCCATTAAACCCCAATTTGGCGAACCAGTTTCTACAGAAGTGTACCAAAAAACCATCGTTTATTTCGAGGAACTAATGAAGTTGCTGCATCCATTTATGCCTTTTCTGTCGGAAGAGTTATGGCAAAATATGGCGAAGCGTAGCAAGGAAAACGCATTGGTTATTTCGCAGCAGAAGCAGGCAGAATCTTATGATGATCAGCTTATTAAAGATTTTGACTATTCAAAAGAACTTATTTCAGGGGTTAGAAATTACAGGCAGTCGAAAGGTATTTCACCTCGAGAAGAAGTGGAGGTTTTCACCAATGCCGATGCTTTTGCCAACGAAAATCTGATCATGAAATTGGCGAATATCAGCGCTATTCATTTTGGTTCCAAAACTGACAAGCCGAGTTTTTCCTTTCTTGTAGGTGCCACAGAAGTTTCCATTCCTTTGAGTGATAACTTAGATTTGGCAGAGGAAAAAATAAAAACCGAAGAAGAAATAAAGTACCTAAAAGGATTTCTTATCTCAGTGGAAAAGAAACTGTCAAATGAAAAATTCATGGCAGGTGCGCCACAACAAGTGGTTGACAATGAATTAAATAAGGAAAAAGATGCGCAGGATAAAATTGCGTTATTGGAAGAGAAATTGAAAACCCTGTAA
PROTEIN sequence
Length: 260
IDWFGNQMDKTILEIEEQFEKFRISDALHLVYKLIWDDFCSWYLEAIKPQFGEPVSTEVYQKTIVYFEELMKLLHPFMPFLSEELWQNMAKRSKENALVISQQKQAESYDDQLIKDFDYSKELISGVRNYRQSKGISPREEVEVFTNADAFANENLIMKLANISAIHFGSKTDKPSFSFLVGATEVSIPLSDNLDLAEEKIKTEEEIKYLKGFLISVEKKLSNEKFMAGAPQQVVDNELNKEKDAQDKIALLEEKLKTL*