ggKbase home page

SCNpilot_expt_500_bf_scaffold_28132_2

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 13 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(912..1277)

Top 3 Functional Annotations

Value Algorithm Source
HlyD family secretion protein n=1 Tax=Capnocytophaga sp. oral taxon 412 str. F0487 RepID=I8ULS4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 120.0
  • Bit_score: 185
  • Evalue 2.60e-44
Secretion protein {ECO:0000313|EMBL:KIC61298.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 120.0
  • Bit_score: 196
  • Evalue 2.10e-47
hypothetical protein; K01993 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 120.0
  • Bit_score: 184
  • Evalue 1.80e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium taiwanense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 366
ATTAACCCTATAAACGGAACTGTACTTACCAATTTTGCGTTACAAGGCGAAATGCAGACGATCGGGAAACCACTCTACAAAATTGCTGATATCAGCACGCTCAATCTGAAAGCATACATTACCGGTGCACAACTGCCGCAAGTAAAACTCGGACAAAAAGTAAAAGTACGCATTGATAATGGCAAAGAAAGCTATAAAGACTATTCCGGAACAATTAACTGGATTTCTTCAAAATCTGAATTTACCCCCAAAACCATCCAGACCAAAGACGAAAGAGCCAATCTGGTTTATGCCATAAAAATAGGCGTGAAAAACGATGGATTTTTAAAGATCGGGATGTACGGAGAAGTGATCTTTAAACCATAA
PROTEIN sequence
Length: 122
INPINGTVLTNFALQGEMQTIGKPLYKIADISTLNLKAYITGAQLPQVKLGQKVKVRIDNGKESYKDYSGTINWISSKSEFTPKTIQTKDERANLVYAIKIGVKNDGFLKIGMYGEVIFKP*